Gene Ecaj_0930 details

Gene Information

• Locus tag: Ecaj_0930
• Symbol: rimM
• ID: 3617862
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ehrlichia canis str. Jake
• Kingdom: Bacteria
• Replicon accession: NC_007354
• Strand: +
• Start bp: 1296288
• End bp: 1296809
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 637698879
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_303559
• Protein GI: 73667543
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAACG ACCTAATATG TCTTGGTGTG ATCACATCAT CTCATGGAAT TAGTGGACAT 
GTAAAGATAA GAACTTTTAC AGAAAGTCCA GAAGATTTTA CATCTTATGG AATGTTAACT 
GATGGAACAA ATACATATAA GATAAGTATA GTATCTGTCA TATCACAAAA TATAATAATT 
GCAAAAATCA AAAACATAGT ATCAAGAAAT GATGCAGATT TACTAAGAAA TAAAAAGCTT 
TTCATAGAAA AAGACAAACT ACCAAACCTT ACAAATAATG ATGAATTCTA CCACAATGAT 
TTAATAGGAT TGAATGTCAT ATTGGAAAAC AACAAAGTTT ATGGAAATAT AAAGAAAATT 
CATAATTTTG GATCTTGTGA TATTATAGAA ATATGTCTTT CCAATTCTAA AAAAAGTACT 
ATGTTACCTT TTACAAAAAA CATATTCCCT TATATAAACA TTAAAGAAAA ATATATAATA 
ATAAATTTAC CAGAAACTAT AGGGAATAGC AGTGACACTT AA 

 

Protein sequence

MRNDLICLGV ITSSHGISGH VKIRTFTESP EDFTSYGMLT DGTNTYKISI VSVISQNIII 
AKIKNIVSRN DADLLRNKKL FIEKDKLPNL TNNDEFYHND LIGLNVILEN NKVYGNIKKI 
HNFGSCDIIE ICLSNSKKST MLPFTKNIFP YINIKEKYII INLPETIGNS SDT