| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0883 |
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| Symbol | secD |
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| ID | 3618527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia canis str. Jake |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007354 |
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| Strand | - |
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| Start bp | 1243985 |
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| End bp | 1245511 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 637698833 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | YP_303513 |
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| Protein GI | 73667497 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATGATA TGTTTTCTAA GTTACAAATT AAGCCTATAA TTGTTTCATT GTTGTGTATA
CTTGCTATAT ATTTAATATT GCCTAATTTC ATTGATAGTA AATTTTTACT TTCTAAACAA
AAGGTTAATC TAGGCTTAGA TTTGCAAGGT GGTGTTTATT TATTGTTAGA AGCAGATTTT
AAAGAATATT TAAAAGAAAG AATGTATGCA CTGTATGATG AGCTAAATGA ATTCTTGTTG
AGTAAAAAAA TAGAATATAG TAGGTTTGAT GTAGAACAAG ATAAACTAGT ATTGACACTA
AAGGATGGTA AGAGTTTTGA TAAGGTAAAG TTATTTGGCA ATAAAAACGT TAGAATATCT
GAGCGAGAAG GTTGTGTTGA AATATCCTTT TATGATAGTT ATAAGTCAGA ATTATTGAGA
AATGTTATAT CTGATGCTAT TAGTAATATC AGGCGTAGGT TAGACAAATC TGGCACGAAG
GAAATTATCA TAAATAGTCA CGGTAAAGAT AGAATATCTT TGCAAGTTCC TGGAGTGCAT
GATACTAGTC AAATTAAAAC TTTGTTAGGT AAAACAGCAA AGCTAACGTT TCACTTACTA
GAAGATGTGA AGCAGTTATC ATCAATTAAT TCTTTGACTA CTGTTTTACT TAAGGATAAT
CGTGGAAATA CTTATCCTAT ATTAAAAAAA GTTGAAATTA GTGGAGATTC TTTAATAGAT
GTATCATCTG GTATAAATAG TCTTGGTAAT GTGATTGTGC ATTTTAAATT AAATAATGAA
GCAGCTAAAA AGTTTGCTAA GATTACAAAA GAAAATTTTA ACAAACCATT TGCTATAGTA
TTGGATGGTG TAGTACTTAC TGCTCCTATA ATACGTGAGC CTATTTTGAC TGGGAGTGGT
GAAATTAGTG GTAATTTTAC TGTTGAAACT GCAAAAGAAT TGTCAATATT GTTAAAATCT
GGTGCCTTAC CAGTACCTTT AAAAGTAATA GAAGAAAAGA CAATAGGTTC TAGTTTGGGT
GCTGAATATA TTAAGCAAGG CAGATTAGCA ATGATAATAT CAGTTATAGC AGTTTCTGTT
TTTATTATAT TTTCTTATCG TATGTTTGGT GTTTTAGCTG TAGTTGGATT AGTTTTTAAT
ATTATTTTTA TTGTTGCTGT ACTTACATTA CTTCAAGCTA CGCTTACATT GCCTGGACTT
GCAGGTATTA CTTTGACTGT AGGGATGTCT GTTGATGCTA ATGTGTTAAT TTTTGAGCGT
ATCAGGGAAG AATTAAATTC TACAAAGAAG TTAAGGTGGG CTGTAGAATC TGGCTTTAAG
AATGCTATGT CAACAATATT TGATTCTAAT ATTACTACAT TAATTGTTGC TGCGGTAATG
TTTGTAATAG GCAGTGGACC AATTAGTGGT TTTGCTATTA CACTGTCAAT AGGTATTTTA
TGTTCTATGT TTTCTGCAAT TACTTTAACA AAGATGTTAA TAGATTTATA TATTAAGTTA
TTCAATTTGA AGACGTTGAA CATATAA
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| Protein sequence | MDDMFSKLQI KPIIVSLLCI LAIYLILPNF IDSKFLLSKQ KVNLGLDLQG GVYLLLEADF
KEYLKERMYA LYDELNEFLL SKKIEYSRFD VEQDKLVLTL KDGKSFDKVK LFGNKNVRIS
EREGCVEISF YDSYKSELLR NVISDAISNI RRRLDKSGTK EIIINSHGKD RISLQVPGVH
DTSQIKTLLG KTAKLTFHLL EDVKQLSSIN SLTTVLLKDN RGNTYPILKK VEISGDSLID
VSSGINSLGN VIVHFKLNNE AAKKFAKITK ENFNKPFAIV LDGVVLTAPI IREPILTGSG
EISGNFTVET AKELSILLKS GALPVPLKVI EEKTIGSSLG AEYIKQGRLA MIISVIAVSV
FIIFSYRMFG VLAVVGLVFN IIFIVAVLTL LQATLTLPGL AGITLTVGMS VDANVLIFER
IREELNSTKK LRWAVESGFK NAMSTIFDSN ITTLIVAAVM FVIGSGPISG FAITLSIGIL
CSMFSAITLT KMLIDLYIKL FNLKTLNI
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