| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0787 |
|---|
| Symbol | |
|---|
| ID | 3617720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia canis str. Jake |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007354 |
|---|
| Strand | + |
|---|
| Start bp | 1104922 |
|---|
| End bp | 1105734 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637698734 |
|---|
| Product | conjugal transfer protein TrbG/VirB9/CagX |
|---|
| Protein accession | YP_303416 |
|---|
| Protein GI | 73667400 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
|---|
| TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTATA TTTTACTACA CACACAGATG AGAAACACAG CAATAGTTTT TGTTTTGATT
TTACTTAGTA GTACAATTTG TTTTGCTAAA CAAGAAGTAC GGTCTATAGC ACAAGATAAT
CACATTAAAG TTATGACTTA CAATCCTCAT GCTATACATA AATACACAGG GTTTTATGGG
TATCAGTCTA GCATACTGTT TGAAGAAGGC GAGACCATAG ATACTATATC TATGGGTGAT
TCAACTGGAT GGCAATTAAT GCCAAAAGGT AATAGGTTAT TTATTAAGCC TGTAGCTGAT
AAGGCAGATA CAAATGCAAC TATCATTACA AACAAGCGTG TGTACTATTT CGAGTTTTTC
GCAGAAGAAG CAAAAGGACT GGATGATCCA AGATTAGCTT ATGAAGTTAG GTTTATATAT
TCTTCCACTG AAAACCTTGT TGGAGAAGAT AGCTCTGGTA TGATATTTCC AGTTAGTCAA
CCTGCTATTC CGGACTTAAC TGATAGCGAA ATTGCAAAAA AAGGATTAAA TTTTGACTAC
CTAGTGTCAC ACAACAGAGG AAGTCAGAGA ATTGTACCAC TTAAGATCTT TGATGATAAT
CAGTTTACTT ATATGCAGTT TGCACACATT AATGCAGATC TACCTTCAAT TTTTACTGTA
GACTCTGAAG GATATGAGTC ACTGATTAAC TTTAGAATAT CGGGTGATTA TGTGATTATT
GAACGAGTTA GTGATGTATT CACTTTACGG TATGGTTCAG ATACAGTATG TGTATTTAAC
AATAAATACA ATAAAAAGAA AAGAAAAAGA TAG
|
|---|
| Protein sequence | MLYILLHTQM RNTAIVFVLI LLSSTICFAK QEVRSIAQDN HIKVMTYNPH AIHKYTGFYG
YQSSILFEEG ETIDTISMGD STGWQLMPKG NRLFIKPVAD KADTNATIIT NKRVYYFEFF
AEEAKGLDDP RLAYEVRFIY SSTENLVGED SSGMIFPVSQ PAIPDLTDSE IAKKGLNFDY
LVSHNRGSQR IVPLKIFDDN QFTYMQFAHI NADLPSIFTV DSEGYESLIN FRISGDYVII
ERVSDVFTLR YGSDTVCVFN NKYNKKKRKR
|
|---|
| |