Gene Ecaj_0595 details

Gene Information

• Locus tag: Ecaj_0595
• Symbol: rpsE
• ID: 3618090
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ehrlichia canis str. Jake
• Kingdom: Bacteria
• Replicon accession: NC_007354
• Strand: -
• Start bp: 855492
• End bp: 856016
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637698540
• Product: 30S ribosomal protein S5
• Protein accession: YP_303227
• Protein GI: 73667211
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0331863
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGTTG TAAAAAAATC ACGAAATGTT CATGGTGCTA ATGATTTTTC TGAGTTAATA 
GTTTCTGTCA GAAGAGTTGC GAAAGTTGTA AAAGGTGGTA GGAGGTTTTC TTTTTCAGTT 
TTAGTAGTTA TAGGTGATGA AAAAGGTAAA GTTGGTTGTG GTATAGGTAA ACATCTTGAA 
GTATCTGAAG CTAAGGTCAA AGCTGTTAAT GCTGCTAAAA AAAATATGAT AAGAGTACAT 
TTACGTGAAT CGAGAACTTT ACATCATGAT GTAAAAGCTA AATTTTGTGC AAGTAAAGTG 
ATGCTAAGGT CAGCTAAAGT AGGGACAGGT ATTATAGCTG GTGGTTCTAT ACGTTTAATT 
TTTGAGGTTT TAGGAGTGCA AGATGTTGTA GCAAAATCTA TAGGCTCTTC AAACCCGCAT 
AATGTTGTGT ATGCTGTTTT TGCTGCTTTT AAGAAAATGC TATCACCAAA ACAGGTAGCT 
AATAAAAGAA GTAGGAAAAT AGGTGATATT ATTGAAAATA GGTAA 

 

Protein sequence

MDVVKKSRNV HGANDFSELI VSVRRVAKVV KGGRRFSFSV LVVIGDEKGK VGCGIGKHLE 
VSEAKVKAVN AAKKNMIRVH LRESRTLHHD VKAKFCASKV MLRSAKVGTG IIAGGSIRLI 
FEVLGVQDVV AKSIGSSNPH NVVYAVFAAF KKMLSPKQVA NKRSRKIGDI IENR