| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0561 |
|---|
| Symbol | |
|---|
| ID | 3617945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia canis str. Jake |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007354 |
|---|
| Strand | - |
|---|
| Start bp | 815260 |
|---|
| End bp | 817245 |
|---|
| Gene Length | 1986 bp |
|---|
| Protein Length | 661 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637698506 |
|---|
| Product | transketolase |
|---|
| Protein accession | YP_303194 |
|---|
| Protein GI | 73667178 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0021] Transketolase |
|---|
| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAACA GATATAATGA TATGGTAAAT ATGGCTAATG CTATTAGGGT GTTGTCAGTA
GATGCTATAC AAAATGCTGC TTCTGGACAT CCTGGTATGC CTTTAGGTAT GGCAGATGTT
GCTACAGTAT TATTTGCAAA GTTTTTGAAA TTTACTCCTA AAGATACTAG TTGGTTTAAT
AGGGATAGGT TTGTATTGTC AAATGGGCAT GGATCTATGT TATTGTATTC TATATTATAT
TTTTTAGGAT GTTTAGATAT AGAAGAAATA AAGAGATTTA GGCAAATTCA TTCTTTAACT
CCTGGACATC CGGAATATGG TTGCACTCCT GGTGTTGATG CTACTACTGG GCCATTAGGA
CAGGGTTTAG CATGTGCTGT AGGTATGGCT ATAGCAGAGA GAGTATTATC TGAAAAGTTT
GGTAGTGAAC TTGTAGATCA TATGACATAT GTTATGGTTG GTGATGGTTG TCTTATGGAA
GGGATTAGTC ATGAGGCAGC ATCTTTAGCA GGGCATTTGC AAATTAGTAA ATTAATAGTG
TTGTTTGATG ATAATGGTAT TTCAATAGAT GGTGATACAT CTTTAGCTGT TTCAGATGAT
ATTAAGGCTA GGTTCTTATC TTATGGTTGG GATGTCTTTG AGATAGATGG GCATGATTTT
GATGAGATTG AATCTTCAAT TGAAAATGCT CGTAGATCTA GTAAGCCTTC TTTAATTTGT
TGTAAGACAA TTATTGGGAA AGGCCTTGTT TCAAAAGAAA ATACATCTGC TGCACATAGT
TGGCCATTTT CAGAAGAAGA AGTAATTTTA ATGAAAGAAA AGTTAGGGTG GTGTGATAAG
CCATTTGATG TACCAGAAGA GATTTTACAG TTATGGAAAA GTATTGCCAG TAAGTCGGAA
AATGAATATA AAGCGTGGCT TAATAAATGT GATGATAAAG CTTCTCAAAG TTTTGTTGAT
GTAATAAAAG AAGGTGTATC TGATTCAGTA TTCTTGAGTT TAAAGAAATT AAAAAAAGAG
CTATGTAATT TGAATTTAAA TGAAGCAACA CGTAAATCTT CTGGTAGAAT ATTGGAAGTT
GTCATGGAAA ATACAAGTAA ATTAATAGGT GGTTCTGCTG ATCTTACTGG TTCTAATAAT
ACTAAACCAC AATTTGCATC AATTATTAAT AAGGATAACT TTAGTGGCTC TTATTTACAT
TATGGTATAA GGGAACATGC TATGGCGGCA TGTATGAATG GTATGGCATT GCATGGAGGA
GTAATTCCTT ATGGAGGAAC GTTTTTAGTT TTTGCTGATT ATTGTAGGCC AGCTATTAGG
TTGTCTGCAT TAATGAAGAG ACATGTTATT TATGTTATGA CGCATGATTC TATTGGAGTA
GGGGAAGATG GACCAACTCA TCAACCTGTA GAACATGTAT CATCTTTAAG AGCTATACCT
AATTTATATG TTTTCAGACC AGCTGATGCT GTTGAAGTAT TAGAATGTTG GGAAATTGCA
TTAAGATTAA CTAGTTCTCC ATCTGCATTT ATATTATCTA GGCAAAATGT AGGTAATGTT
CGTAGTCTAT ATGTTGAAGA AAATTTATCT AGCAAAGGTG CATATATTAT ACGTGAATAT
GAAAAAGATT TAGATGTTAC GATCTTTGCT ACAGGGTCTG AGGTAGAAGT AGCATTAAAA
GCTGCTGATA TTTTAAAAGG TAAAGGGTTG GATGCAAGAA TAGTGTCTGT TCCTTGTTGG
GAATTGTTTG CTCAGCAAGA TAAGAAATAT ATATTCAGTT TGTTAAATAA TAAAAGTATA
AAAGCTGCTA TAGAGGCTGC AAGCTCATTT GGATGGCATA AATATATAGG AGAAGATGGA
GTTTTTGTAG GATTAGATGA TTTTGGATTA TCTGCTCCAT GTAAGGATTT ATATAAGCAT
TTTGGAATCA CTGCAGAGAA TTTAGTGAAT AAAATACTTG ATAAATTAAA AATTAATATT
GATTGA
|
|---|
| Protein sequence | MGNRYNDMVN MANAIRVLSV DAIQNAASGH PGMPLGMADV ATVLFAKFLK FTPKDTSWFN
RDRFVLSNGH GSMLLYSILY FLGCLDIEEI KRFRQIHSLT PGHPEYGCTP GVDATTGPLG
QGLACAVGMA IAERVLSEKF GSELVDHMTY VMVGDGCLME GISHEAASLA GHLQISKLIV
LFDDNGISID GDTSLAVSDD IKARFLSYGW DVFEIDGHDF DEIESSIENA RRSSKPSLIC
CKTIIGKGLV SKENTSAAHS WPFSEEEVIL MKEKLGWCDK PFDVPEEILQ LWKSIASKSE
NEYKAWLNKC DDKASQSFVD VIKEGVSDSV FLSLKKLKKE LCNLNLNEAT RKSSGRILEV
VMENTSKLIG GSADLTGSNN TKPQFASIIN KDNFSGSYLH YGIREHAMAA CMNGMALHGG
VIPYGGTFLV FADYCRPAIR LSALMKRHVI YVMTHDSIGV GEDGPTHQPV EHVSSLRAIP
NLYVFRPADA VEVLECWEIA LRLTSSPSAF ILSRQNVGNV RSLYVEENLS SKGAYIIREY
EKDLDVTIFA TGSEVEVALK AADILKGKGL DARIVSVPCW ELFAQQDKKY IFSLLNNKSI
KAAIEAASSF GWHKYIGEDG VFVGLDDFGL SAPCKDLYKH FGITAENLVN KILDKLKINI
D
|
|---|
| |