Gene Ecaj_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcaj_0541 
Symbol 
ID3617963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia canis str. Jake 
KingdomBacteria 
Replicon accessionNC_007354 
Strand
Start bp791016 
End bp792281 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content29% 
IMG OID637698487 
Productdiaminopimelate decarboxylase 
Protein accessionYP_303175 
Protein GI73667159 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID[TIGR01048] diaminopimelate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.407931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTTC TTGCTAATCC ATTTTTTCAT TATAAAAATA ACATACTGAA TATAGAAAAT 
GTAAATGTAC TAGATATTGC AAAAGATATT GGAACTCCTG TTTATTGTTA CTCTTTAAAT
GCTATAAAAA ATAACTATAG GCAATTTCAA GAAAATCTAC CTAACAACTC AATCATATGT
TATGCAGTAA AATCAAACTC TAATTTATCT ATTTTAAGTT TACTAAATTC ACTTGGAGCA
GGAGCGGATG TTGTATCTGA AGGTGAAATA CGTCGTGCTA TTGCAGTTGG CATTTCACCA
AATAAAATAG TATTTTCCGG TGTAGGTAAG ACTGAGCAAG AAATAAGTTT TGCACTAGAT
AATAGAATAT TACAATTTAA TGTAGAATCT ATTGAAGAAC TATCTCTTAT AAACACAATT
GCATGTAAAA AAAATATAAT CGCACCAGTA TCTATTAGAA TCAATCCAAA TATTAGTGCA
GATACAAACG ATAAAATTAC AACTGGTCTA AAAGTCAATA AATTTGGAAT ACCAGAAGAA
TTACTTGATC AAATCTTTAA CAATAATTTC ATAGGTATTA GGATTATAGG AATATCTGTA
CATATAGGGT CACAAATATC AAATTTAAAT ATTTTCCAAA ATACAATTGA TAAAATCAAA
AAAATAGTAA AAATTTTTGA GCAACGCAAC ATGCAAATTA TCAGGGTTGA TCTTGGTGGT
GGACTTGGCA TACCATACAA AAATGCTGAT GTTTTCCCCA CAATCCCAGA ATACGCAAAT
TTACTAAAGA AGAATTTTGA AAATGAGAAT TATCAAATCA TATGTGAACC TGGTAGAGCA
CTAATAGGCA ATACAGGAGT ATTACTTACT AAAGTGCTAT ATCATAAACA CAATCAAGAA
AAAAGTCACA TTATATTAGA TGCCGGTATG AACGATCTAA TACGTCCAGC ATTATATAAT
GCTGAACATA CAATAATACC AGCAATTTCA ACATCTACAC CATTGCAATT ATATGACATA
GTAGGTCCTA TATGTGAATC TGACGATACT TTTGCATATA ATTATCATAT CAATAACTTG
CAAAATGGAG AAATAGTAGC AATATGTACA ACTGGAGCAT ATGGTTCTTC AATGTCAAGT
AACTACAATT CTAGACCATT AGTACCTGAA GTAATGGTTA GTAACAGTAA TTATGACATT
ATACGTCATC GTCAAACTTA TGAAGATATG TTAAAAGATG AGGTTATACT AGATTTCAAT
AAATAA
 
Protein sequence
MIFLANPFFH YKNNILNIEN VNVLDIAKDI GTPVYCYSLN AIKNNYRQFQ ENLPNNSIIC 
YAVKSNSNLS ILSLLNSLGA GADVVSEGEI RRAIAVGISP NKIVFSGVGK TEQEISFALD
NRILQFNVES IEELSLINTI ACKKNIIAPV SIRINPNISA DTNDKITTGL KVNKFGIPEE
LLDQIFNNNF IGIRIIGISV HIGSQISNLN IFQNTIDKIK KIVKIFEQRN MQIIRVDLGG
GLGIPYKNAD VFPTIPEYAN LLKKNFENEN YQIICEPGRA LIGNTGVLLT KVLYHKHNQE
KSHIILDAGM NDLIRPALYN AEHTIIPAIS TSTPLQLYDI VGPICESDDT FAYNYHINNL
QNGEIVAICT TGAYGSSMSS NYNSRPLVPE VMVSNSNYDI IRHRQTYEDM LKDEVILDFN
K