| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0471 |
|---|
| Symbol | ispG |
|---|
| ID | 3618039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia canis str. Jake |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007354 |
|---|
| Strand | - |
|---|
| Start bp | 688979 |
|---|
| End bp | 690247 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637698415 |
|---|
| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
|---|
| Protein accession | YP_303106 |
|---|
| Protein GI | 73667090 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
|---|
| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0538957 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTGTG ATGTTATAAA TAGAATTTTA AATGAAGAGG ATTTGTTTGA TTGTATAAAA
AGAAAAAGTA AGTTAACTTA CGAGGTTAAT GTTGGTAATG TAATAATTGG CGGTAATAAC
CCTATAGTAG TACAATCAAT GGCATTAGGT GGATCTGGAG ATGCTAATAA AGATGCACAT
GAGGTTTTAG AGTTAGCAAA AGCTGGGTCT GAACTGGTAA GGGTAGCGGT TAATTCAGAA
CAGGCTATAA AAAATATTCC TTATATTAGG GATGTACTAG TAGATAATGG GTTTGATCAC
AAGATGATAA TAGGATGTGG ACAATATGAA ATTGCTAGAT TAGTAAAAGA ATATCCAGAA
TGTGCGTCTG CTTTAGGGAA AATACGTATA AATCCAGGAA ATATTGGTTT TGGTAATAAA
AGAGATAAAA ATTTTGAAGA TGTTATAGAG TTTGCAATCA AATATGATAT ACCTATTAGA
ATAGGTGTGA ATTGGGGAAG TTTAGATAAG TATTTAGCTT CAAAATTAAT GAACGATAAT
GCGTTGCTTA GCAATCCTAA ACCAGATTAT ATAGTTTTAC AAAAAGCATT GGTGATTTCT
GCTGTGACAA GTGCTAAACG TGCAGAAGAA ATAGGTCTTT CAAAAAATAA AATAGTTATA
TCTTGTAAGA CTAGTAAAAT ACAAGATTTA ATTCCTGTTT ATACAGTGTT GTCAAATGTG
TGTAATTATC CATTGCATTT GGGTTTGACA GAAGCAGGAT CTGGAATTAA AGGAGTAGTT
GGTAGTGTTG CAGGAATATC TTATTTATTG CTTAATGGTA TCGGTGATAC TATACGTGTC
TCACTAACTC AGCAACCTGG AGAGTCAAGA ACAACTGAAG TAAAATTGTG TCAAGAAATT
TTACAAAGTA TAGGGTTAAA GAATTTCAAT GCACAAGTAA CTTCATGCCC AGGTTGTAAT
AGAACTAATC CTAAGTATTT TCATCAACTA GTTAAAGATG TAAATGATTA TATAGCAGAC
CGTATGCCTG TATGGAGGAA TACTAATCCT GGAGCTAAAG ATATGGTTGT AGCAGTGATG
GGTTGTATAG TTAATGGTCC TGGTGAAAGT AAACATGCTA ATTTAGGTAT TAGTCTTCCT
GGTTATGGTG AGAGGCCTGT AGCTGCTGTA TATCAAGATG GGGAAAAGCT ATGTACATTA
GAGGGTAAAA ATATTTTTGA GCAGTTTGTG TCAATAATTG AAAATTATGT TAGTGTAAAC
TATCAATGA
|
|---|
| Protein sequence | MECDVINRIL NEEDLFDCIK RKSKLTYEVN VGNVIIGGNN PIVVQSMALG GSGDANKDAH
EVLELAKAGS ELVRVAVNSE QAIKNIPYIR DVLVDNGFDH KMIIGCGQYE IARLVKEYPE
CASALGKIRI NPGNIGFGNK RDKNFEDVIE FAIKYDIPIR IGVNWGSLDK YLASKLMNDN
ALLSNPKPDY IVLQKALVIS AVTSAKRAEE IGLSKNKIVI SCKTSKIQDL IPVYTVLSNV
CNYPLHLGLT EAGSGIKGVV GSVAGISYLL LNGIGDTIRV SLTQQPGESR TTEVKLCQEI
LQSIGLKNFN AQVTSCPGCN RTNPKYFHQL VKDVNDYIAD RMPVWRNTNP GAKDMVVAVM
GCIVNGPGES KHANLGISLP GYGERPVAAV YQDGEKLCTL EGKNIFEQFV SIIENYVSVN
YQ
|
|---|
| |