| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0442 |
|---|
| Symbol | prfA |
|---|
| ID | 3618047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia canis str. Jake |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007354 |
|---|
| Strand | - |
|---|
| Start bp | 649672 |
|---|
| End bp | 650751 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637698388 |
|---|
| Product | peptide chain release factor 1 |
|---|
| Protein accession | YP_303080 |
|---|
| Protein GI | 73667064 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0216] Protein chain release factor A |
|---|
| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.34864 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTTG ATAGTAATTT AGAGGAGTTA TATCAAAAAT TCTGTAAGTT GAAAAGTATA
TTAGAAGACC CAAGTCAATT AAGTGTGGAT TCTTTTGTTG CAGCTTCAAA AGAATATTCA
GAGCTATTGC CTGTAATATC AGTAATAGAT CAGTATAATA GTCTACAAAA AGATATTGCA
GATTTAGAAG AATTAATTAA TAATCCAGAA ACTGACCACG AATTAAAAAG TTTAGCTAAG
GAAGAATTCT ATGAAAGGCA AAAGCAGTTG CCTAAAATTA AGAATAAATT GAAGTTATCT
CTTATTCCAA AAGATAGAGA CGATGCTCGT AATGCTATTT TGGAAATTAG AGCAGGTACA
GGAGGAGAAG AAGCTGCATT ATTTGTTACT GATTTATATA GGATGTATAC AAAATATGCT
GAACAAAAAA ATTGGAAATT TGAACAGATC AATTCATCCT CAACTGGTAT AGGTGGACAT
AAGGAAGTTT CATTATGTAT AAGTGGGTCA AATGTATTTG CAAGATTGAA ATTTGAATCT
GGTGTACATA GAGTACAAAG AGTACCAGAA ACTGAAGCAT CTGGAAGGCT TCACACTTCA
GCTGCTACAG TAGCAGTTTT ACCAGAAATT GAAGAAGTAG ATTTAAAAAT AGATGAAAAA
GATTTAAGAA TAGATGTGTA TAGATCAAGT GGCCCAGGTG GACAATCTGT AAATACAACT
GATAGTGCTG TACGTATTAC GCATATACCA AGTGGAATTG TTGTTATACA ACAAGATGAA
AAATCACAAC ACAAAAATAA AAACAAAGCT CTTAAGGTAT TAAGAGCAAG GTTATATAAT
CTTGAAAAGC AAAAGAGAGA CTCAGAAATC TCACAAATGA GAAAAAGTCA GATAGGGTCA
GGAGATCGTT CTGAACGTAT AAGAACTTAT AACTTCCCTC AATCTAGAAT TACAGATCAT
AGAATAAATC TTACATTATA CAGATTAGAG GATATTATGA AAGAAGGAAA TTTAGATGAG
TTCATAGATG CATTAATAGC TGAAGATGAA GCTAATAAGT TAAAAAATTT ACATATTTAG
|
|---|
| Protein sequence | MSFDSNLEEL YQKFCKLKSI LEDPSQLSVD SFVAASKEYS ELLPVISVID QYNSLQKDIA
DLEELINNPE TDHELKSLAK EEFYERQKQL PKIKNKLKLS LIPKDRDDAR NAILEIRAGT
GGEEAALFVT DLYRMYTKYA EQKNWKFEQI NSSSTGIGGH KEVSLCISGS NVFARLKFES
GVHRVQRVPE TEASGRLHTS AATVAVLPEI EEVDLKIDEK DLRIDVYRSS GPGGQSVNTT
DSAVRITHIP SGIVVIQQDE KSQHKNKNKA LKVLRARLYN LEKQKRDSEI SQMRKSQIGS
GDRSERIRTY NFPQSRITDH RINLTLYRLE DIMKEGNLDE FIDALIAEDE ANKLKNLHI
|
|---|
| |