| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0315 |
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| Symbol | |
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| ID | 3617737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia canis str. Jake |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007354 |
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| Strand | - |
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| Start bp | 474557 |
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| End bp | 476425 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637698257 |
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| Product | RNA polymerase sigma factor rpoD |
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| Protein accession | YP_302957 |
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| Protein GI | 73666941 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATC TACAAACAGA TAAAGAATTG CTCAAAACAC TTGTAAGTAA GGGGCTAAAA
CAAGGCTTTG TTACATTCAA CGATATCAAC GATGTTTTCT CTGATTATGT ATTATCAGCT
GATAATATAG ATGAAACCAT ATCAATGCTT CAAGATTCAG GCATTAATGT TCTCGAACAA
AGTGATGAAG ATGAAGCAAA TAGCATAGTA GAAGAAAATA GAATAAAAGA AGACTTAGAT
GAAGATGATG TATCAGATGG AGGTATAAAA TCTTGGGATT TTGGGCAAAC GGATGATCCT
ATACGCATGT ATCTATGTGA AATGAGTTCA GTTGAATTAC TCTCTCGTGA AGGAGAAATT
GAAATTGCAA AAAAAATAAA ATCAGAAAAA GTAAATATGC TAAGGTCATT AGTAGAATCT
CCAGTAGTAC TGCGTACATT CATGTCATGG AGAGATGACT TAGTAAATGA ACAAATAATG
TTAAGAGATC TAATAGATTT AGATGCAAAT TACAGATATG AATTCCCAGA AAAATTTGCC
GATGCTGATG AAGCTAGTGT TTTAGATTAC GATAAAGATT TAATAGATGA ATCTGATGAA
GATACAGACA TTTCAGAAGA TGACGATGAA GAAAATGTTT CAATAAACGC TTCAATATTG
GAAATGGAAA ATGCATTACT GCCTAAAGTT GTAAGTATTT TAGATTCAGT AATTGCATCA
GCAGAAAAAA TTTTAGAACT CAAGAAACAG TATCAAGGCA AAATTAATCA AGACATTGAA
AAACAATACA ACGATCTACA TGATAGTATA TGGGAAATGA TATATCAAAT TAAACTCAGT
AATTCTGCAG TATTATCAAT CACACAACAA ATCTATAGTT TAAGCAAATC AATCGCAGCA
GAAGAAGCTA AAATTATTTC CCTTGCTGAA AGTTATGGCA TACAACGCAA AGATTTTCTA
GATGCATACA ATACTAACTC TGTACTACAA AAAAAAGGTA CTTCTCCACA ATGGAACAAT
CTACTAGCAA ATGAGGAAAG TAACATAGTA AGTATGTATA GTAAAATTAA ATTACTTTCT
GGAGAGAACA ACCTAACTGA ATTTAAAGCA CTAGTAACAA AAATACAAAA GCACGAACGT
GCAGCAAATC AAGCAAAGCA AGAGATGATT AAGGCAAATC TAAGATTAGT AGTATCAATT
GCAAAAAAAT ATTCAAACAG AGGCTTACAA TTTCTAGATC TAGTACAAGA AGGAAATATT
GGATTAATGA AAGCAGTAGA TAAATTTGAC TATAAGCGTG GATATAAATT TTCAACCTAT
GCAACGTGGT GGGTCAGGCA AGCAATTACC AGAGCAATAG CAGATCAAGC ACGTACTATT
AGAATTCCTG TACATATGAT TGAAACTGTA AATAAAATTA ACCGTACGTT AAGACAAATG
CTACATGAAA TGGGCAGAGA ACCAACACTA GAAGAACTAT CAGCAAAATT AAATATTAAT
GTAGATAAAA TACGTAAGGT CATGAAAATA GTCAAAGATC CTGTAAGTTT AGAAAGTCCT
ATAGGAGATG ATGATAGTAG TACATTTGGT GATTGCATAG AAGATAAACG CGCAGTAAAA
CCAGAAGATG CAGCAGTATT AGCAGATTTA AGAGAAATCA CCACAAAGGT ACTGTCAACA
TTAACACCAA AAGAAGAAAG AATTTTACGT ATGAGGTTTG GAATAGGTAA AGGTGGAAAA
GATCATACTC TAGAGGAGGT AGGAAAATTA TTTAACGTAA CAAGAGAACG TATACGACAA
ATTGAAGCAA AAGCTTTACG CAAATTACGT CATCCAAGCC GTGCAAGAAA GCTCAGAGGG
TTCTTTTAA
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| Protein sequence | MKDLQTDKEL LKTLVSKGLK QGFVTFNDIN DVFSDYVLSA DNIDETISML QDSGINVLEQ
SDEDEANSIV EENRIKEDLD EDDVSDGGIK SWDFGQTDDP IRMYLCEMSS VELLSREGEI
EIAKKIKSEK VNMLRSLVES PVVLRTFMSW RDDLVNEQIM LRDLIDLDAN YRYEFPEKFA
DADEASVLDY DKDLIDESDE DTDISEDDDE ENVSINASIL EMENALLPKV VSILDSVIAS
AEKILELKKQ YQGKINQDIE KQYNDLHDSI WEMIYQIKLS NSAVLSITQQ IYSLSKSIAA
EEAKIISLAE SYGIQRKDFL DAYNTNSVLQ KKGTSPQWNN LLANEESNIV SMYSKIKLLS
GENNLTEFKA LVTKIQKHER AANQAKQEMI KANLRLVVSI AKKYSNRGLQ FLDLVQEGNI
GLMKAVDKFD YKRGYKFSTY ATWWVRQAIT RAIADQARTI RIPVHMIETV NKINRTLRQM
LHEMGREPTL EELSAKLNIN VDKIRKVMKI VKDPVSLESP IGDDDSSTFG DCIEDKRAVK
PEDAAVLADL REITTKVLST LTPKEERILR MRFGIGKGGK DHTLEEVGKL FNVTRERIRQ
IEAKALRKLR HPSRARKLRG FF
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