Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ecaj_0303 |
Symbol | |
ID | 3617725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ehrlichia canis str. Jake |
Kingdom | Bacteria |
Replicon accession | NC_007354 |
Strand | + |
Start bp | 452678 |
End bp | 453604 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 637698245 |
Product | ribosomal large subunit pseudouridine synthase C |
Protein accession | YP_302945 |
Protein GI | 73666929 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00443703 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGGTA AATATTATAC TGTAAAAGAA GATGATCAAG ATGTAAGGGT AGATAAATTT GTTAGAAGAG TGTTAAAAAT TCCTCAGTCT TTAGTAGAGA AATTTTTACG TAAAGGTATA GTTTTACTTG ATAATGCAAA GGTAAAGTCT AATACAAGGA TTAAAACTGG AAATGTAATT TACATAAAGT GTAATACTAT AATTGGTGAA GAAATACACA CTAAAAGAAT TTGTAAAACT GACAGTTCTT ATCTAATTAA TTTGATTAGT AATAGCATTT TGTATGAAGA TGATGATGTG TTGATTATTA ATAAACCTGC TGGAGTATCT GTTCAAGGAG GTACGAAGGT TAGAATTAGC ATAAGTGATA TTTTAGATAA GATTAGAGAT GGTGAATCTA TGAGAATTGT TCATAGATTA GATAAAGATA CGAGTGGGAT TTTGATGTTA GCTCGTAATG CAAGAGCATC TAGGTTAATT ATGCATGAGT TCAAGAATAG AAGGGTAGAA AAGAAATATT TGGCATTGAC ACAAGGAATT CCAAAAAATG ATGTTGGTGA AATTAATCAT TCCATTACCA AGAAAAAGCA TAATTTTTAT GAAAATATTG GTACTGGTAA TTCAATTTTT CAAGAAGCTA TAACTTCATT TTTTGTATTG AAGAAGTTAC CTTATGATAT TGGATTACTT GAATTAAAGC CTAAAACTGG TAGAAAACAT CAGATTAGGA TACACCTTTC ACATATTGGA TGTTCTATTA TTGGGGATAA AAAGTATGGG AAGTTTTGTA ATCATGTGTT AAATGATCAC TTACAATTAC ATGCACATTT TTTATCAATT GATATAGGAA ATAAAAAATT ATCATTTACT GCTCCTATGC CAGATTATAT GAAAGATACA ATTATGAATT TAGAAAAATT GTTATAG
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Protein sequence | MVGKYYTVKE DDQDVRVDKF VRRVLKIPQS LVEKFLRKGI VLLDNAKVKS NTRIKTGNVI YIKCNTIIGE EIHTKRICKT DSSYLINLIS NSILYEDDDV LIINKPAGVS VQGGTKVRIS ISDILDKIRD GESMRIVHRL DKDTSGILML ARNARASRLI MHEFKNRRVE KKYLALTQGI PKNDVGEINH SITKKKHNFY ENIGTGNSIF QEAITSFFVL KKLPYDIGLL ELKPKTGRKH QIRIHLSHIG CSIIGDKKYG KFCNHVLNDH LQLHAHFLSI DIGNKKLSFT APMPDYMKDT IMNLEKLL
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