Gene Ecaj_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcaj_0287 
Symbol 
ID3617672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia canis str. Jake 
KingdomBacteria 
Replicon accessionNC_007354 
Strand- 
Start bp434052 
End bp434630 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content30% 
IMG OID637698232 
ProductNADH (or F420H2) dehydrogenase, subunit C 
Protein accessionYP_302932 
Protein GI73666916 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.282798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATA ACAATAATGC AATAGATAAT ATCATTGCAC ATATCAACAC ATCCATAAAT 
GTAAAGTGCA CTATAAAAGA CAGCATAAAT TTAGAGTTAA ATTCAAATGT AAATGACATT 
TACAGTCATA TTTTGTTTTT ACGTAATGAT ACAAAATGTA AATTTCATAT ATTAATTGAT 
ATTTTTGCAA TAGATTATCC AAGCAGGCCA GCTAGATTTG AAGTAGTTTA TTCATTACTA 
AGTATAATCA ATAATATAAG AATATTCTGC AAAGTACCTC TACAAGAAAA TGAGAGCATT 
CCATCTATCA CTAACCTGTT CAGCGCTGCG GGATGGTTTG AAAGAGAAGT ATTTGACATG 
TATGGAATAA TATTTGCTAA TAATCCAGAT TTACGAAGAA TCTTAACAGA TTACGGTTTC 
TCTGGTCATC CAATGTTAAA GGACTTTCCT CTAACTGGTT ATAAAGAAGT ACGGTATGAC 
ATATTAAAAA AAGAAGTAAC ATATGAAGCT GTAAATCTAC AGCAAGACTT TCGGTCTTTT 
GATTTCCTAT CCCCATGGAA AGAAGTAAGT AATGAATAA
 
Protein sequence
MSDNNNAIDN IIAHINTSIN VKCTIKDSIN LELNSNVNDI YSHILFLRND TKCKFHILID 
IFAIDYPSRP ARFEVVYSLL SIINNIRIFC KVPLQENESI PSITNLFSAA GWFEREVFDM 
YGIIFANNPD LRRILTDYGF SGHPMLKDFP LTGYKEVRYD ILKKEVTYEA VNLQQDFRSF 
DFLSPWKEVS NE