Gene Ecaj_0226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcaj_0226 
SymbolmnmA 
ID3617648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia canis str. Jake 
KingdomBacteria 
Replicon accessionNC_007354 
Strand- 
Start bp338795 
End bp339898 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content34% 
IMG OID637698171 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_302873 
Protein GI73666857 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.950279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGATG ATTTTAAAAT AGACCCACTC GTTAAAAATA AGTCACCTTC ATCAACAACT 
GTAGTTGTTG CTATGTCTGG TGGCGTTGAT AGTTCAGTAG CAGCAGCATT ACTTCATAAA 
TTAGGATACA AAGTTATTGG TATCACTTTA CAACTATACA ATAATACCAG TGGGAAAGGA 
GGATGTTGTG GCAGCACAGA TACTCAAGAT GCAAAACAAG TCGCATCAAG TATGGGTTTC 
CCTCACTACA CTCTCAACTA TGAAAAAGCA TTTAGAGAAG AAGTAATAGA AAACTTTATA 
GACACCTATA CACAAGGGAA AACACCCATA CCATGTGTAA AATGTAACCA AGTTATCAAA 
TTTAGAGATT TACTCAACAC AACTAAATCA CTTGGTGCAG ATGTTCTAGT AACTGGCCAT 
TACATCAGAA AAGTAGAACA AGATGATGAG ATATATGTAT ACTCAAGTAA AGACACAAAA 
AAAGATCAAA GTTATTTTTT ATTTGCAACT ACAATAGAAC AGCTAAAGTT TCTTAGGTTC 
CCATTAGGAA ATTTTCATAA AGATAACATA AGAAAATTAG CAAAGTACTT TAACTTGTCA 
GTAGCAGCCA AACCAGATAG TCAAAATATA TGTTTTGTCA CAGACACATA TAAAAATACA 
ATTGCACACC TAAGACCACA AACTGTAAAA AAAGGTCACA TTATAGATAC CAATGGAAAT 
ATATTAGGAG AACATAATGG TATAGTAAAC TTCACAATTG GACAAAGAAG AGGTATTGGA 
TTAGCATCCA AAGAACCATT ATATGTTACA AAATTAAACC CAGACACCAA TGAAGTAACA 
GTAGGTCCAA AATCCGCATT ATTGCAAAAC AAATTACACA TAGAAGACAT AAACTGGCTA 
CTTAAAGATA AAATTCCATA CAGTGGACTA AGTGTAAAAG TAAAATTAAG ATCATCCCAC 
TCCGGTAGTA CAGCAATCAT CTACCCAAAT GACATGAACA AGGCAACTGT AATACTACAA 
GATACATATT GTACAGTAAC TCCTGGGCAA GCATGTGTTG TATATGATGG AGATAGAATG 
CTCGGTGGTG GGTGGATATG TTAA
 
Protein sequence
MLDDFKIDPL VKNKSPSSTT VVVAMSGGVD SSVAAALLHK LGYKVIGITL QLYNNTSGKG 
GCCGSTDTQD AKQVASSMGF PHYTLNYEKA FREEVIENFI DTYTQGKTPI PCVKCNQVIK 
FRDLLNTTKS LGADVLVTGH YIRKVEQDDE IYVYSSKDTK KDQSYFLFAT TIEQLKFLRF 
PLGNFHKDNI RKLAKYFNLS VAAKPDSQNI CFVTDTYKNT IAHLRPQTVK KGHIIDTNGN 
ILGEHNGIVN FTIGQRRGIG LASKEPLYVT KLNPDTNEVT VGPKSALLQN KLHIEDINWL 
LKDKIPYSGL SVKVKLRSSH SGSTAIIYPN DMNKATVILQ DTYCTVTPGQ ACVVYDGDRM 
LGGGWIC