| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0187 |
|---|
| Symbol | |
|---|
| ID | 3617624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia canis str. Jake |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007354 |
|---|
| Strand | + |
|---|
| Start bp | 280752 |
|---|
| End bp | 284123 |
|---|
| Gene Length | 3372 bp |
|---|
| Protein Length | 1123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637698129 |
|---|
| Product | DNA polymerase III alpha subunit |
|---|
| Protein accession | YP_302836 |
|---|
| Protein GI | 73666820 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0587] DNA polymerase III, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.701424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAA TATTTGTTCA TCTTAGATCT CATAGTGATT ACTCATTGCT TCATGGGATG
GTAAAAATAG AGTCTTTAGT GAACTTGTGT GTGCAACATA ATATGCCTGC GTTGGCATTG
ACAGATTCAG GTAATTTGTT TGGGTCTTTG GAATTTTCTG ATTGTGCTTC TAATTCAGGT
ATACAGCCTA TTATAGGTTG TAATATAATG ATAAGTTATA ATGGTGATAA TATTGGAGAA
CTAATATTAT TAGTTAAAAA TCAAGTAGGG TACAGTAATA TTGTTAATCT TGTTAGTAAT
TCATTTAGAA ATGATCAGTC CGGTAAAATT AATAGAATAG ATTTAAATAC ACTTATTAGC
CTAAAAGATG GGATTATCGT TCTAACAGGA GGACATGATG GGTTTTTAGC TCAACTTTTA
TTGGGAAATG TAATTGACTA TGGCATTATA GATAAATTAT TACTTGCTTT TAAAGGTAAT
CTTTATGTTG AACTTCAACG TCATAATATT GAGGAAGAAA AGCTAATAGA AAGAACACTT
ATTAAGTTTG CTTATGAAAA GGATGTCCCA TTAGTCGCAA CAAATGATAT ACTATTTGCA
AGAAGAGAAG ATTTTTTAGC TCATGATGTC TTATCTTGCA TATCAGATGG TAATTATATT
GCTCAAGAAG ATAGAAAAAT GTTTACAGAA GAGCATTATT TTAAGTCTTC TAATGAGATG
CATGAATTAT TTGTGGATAT TCCTGAGGCA ATTTCTAATA CTGTATTAAT AGCTCAGCGT
TGTTCTTTTA TGCCAGAAAT TAGGAAACCA ATGTTACCTC ATTTTCCTTG TTCTAGCGGT
AGAAATGAAA GTCAAGAATT AATAAGCCAA GCAATTGATG GTTTGAATAG TCGTTTGAAA
GATAGCAATT TGTCTAAAGA ACAAACATCT AAGTATTATG AAAGATTGCA TTATGAATTA
GATATTATTA TTTCAATGGA TTATGCAGGA TACTTTTTAA TAGTATCGGA TTTTATATGT
TGGAGTAAAA GGAATGATAT AATGGTAGGC CCTGGTAGGG GTTCTGGTGC TGGTTCTCTT
GTTGCTTGGT CTTTACAGAT TACTGATCTT GATCCTATAG AATTTGGTTT AATTTTTGAA
AGGTTTTTAA ATCCTGATCG TATTTCAATG CCGGACTTTG ATATTGATTT TTGTCAGGAA
GGCAGAGATC ACGTTATAGA ATATGTAAGA AAAAAATATG GTTATGTTGC TCATATTATA
ACTTTTGGTA AATTGCAGGC TAAAGCTGTG CTTCGTGATG TTGGTAGAGT TATGCAGATG
CCTTATTTTC AAGTAGATAG AATTTGTAAA ATGATTCCTC ATAATCCAGT TAGACCTGTT
ACTTTATCTG AAGCGATAGA GATGGATAAA AATTTACAGA AAGAACGTGA TGATGATGAG
ACAGTTGCTA AATTATTAGA AATATCATTA AAGCTTGAAG GACTTTATCG TCATGTTTCA
ATACATGCTG CAGGTATTGT AATTTGTGAT AGAAGATTAG AAGAATTGCT GCCTTTATAT
TATGATAATG TGTCTTTTCT TCCTATTACA CAGTATAATA TGAAATATAC TGAAAAGGCT
GGATTAGTTA AATTTGATTT TTTAGGATTA CGTACATTAA CTGTTATAAA TCAAATTTGT
CATTTGGTGA ATAATGGAGG CCAAAATGTT GATATATCAC GTATTCCTTT AAATGATAAA
AAAACATATG AAATGTTATC TGCTGGTGAT TCTGTTGGTG TGTTTCAGCT TGAAAGTTCA
GGTATGAGAG AAGTAATTAG TAAACTAAAA CCAGATAATA TAAATGATAT TATTGCGTTA
ATTTCTCTTT ATAGACCAGG TCCTATGGAT AACATATCTA TATACATAGC GCGTAAACAT
GGGTTTGAAA AGCCAGATTA TATACATCCA ATTCTTGAAG GTGTTCTTAA AGAGACTTTT
GGCGTTATCA TTTACCAAGA ACAGGTCATG GAAATTGCCA AGATCATGGC TGGATATAGT
TTAGGTGAAG CAGATTTGTT AAGACGTGCA ATGGGTAAGA AAATCAAAGA GGAAATGGAT
AATCAACGTA GAGCATTTAT AAGTGGTGCT ATTAATAATG GAATAGAAGA AGAAAAGGCA
AGCTATATTT TTGATCTGGT GGCGAAATTT GCAGGTTATG GATTTAATAA ATCTCATGCT
GCAGCTTATG CATTAATTAG TTATCAAACT GCTTATTTAA AAGCTAATTA TACATTAGAG
TTTTTTACTG CATCTATGAA TTTAGATATA ACAGATAAAG ATAAGTTAGA AATGTTATGT
CATCAAGCAA AGTTGCATGG TATAAAGATA TTGCCGCCGG ATATTAATAC TTCTAAAGTA
TTCTTTACTA TTGAAGGATC GTCATCTATT AGATATGCTC TTGGAGCTCT TAAAAATGTA
GGGCAACACT CAGCAAAAGA AATAGTAGAT GATATTGCCT ATAAAGATAT ATGGGATTTT
ATTGATAGGG TAAGTACCAA ATGTGTACAT AAGAGAATAC TAGAAAGTAT TATTAAGGCT
GGAGTTCTAG ATAGTATTCA TAGTAACAGA AAGCAGCTTT TTGAGTCAGT TTTTCTGTTT
TTAGACATTA TTGAATATAA TAAATATAAT GCTAATTTTA ATCAGTTCAG TTTATTTACT
GATAGGGCTC ATTATAAATT ATCAGAGACT GATGATTGGA CTAAAGAAGA GAAATTAGAT
AATGAATTTT CTTCTATAGG GTTTTATCTT AATCATCATC CTATGGAAAA CTATAAGTGT
CTTTTGGAAA AGTTGAATAT AGGATTTATT AACTATGATG ATAGGTCTGC TTATAATAAT
AGAATTGTAG GGATAATTTC TAGTGTTAAA GTACGTTCTG CAAGTAGGGA TAAATTTGCA
GTTGTGACTC TTTCTGATCC TTATAATATT CATGAAATAG CTTTTTATAA TGGTAGTGTA
ATAGAGGACA ATAAGGATTT ATTTACTAGT GGTGCGCCTG TTATTATTGA AATGGATAAT
GATTTTTATA GCACTGCAGC AAGATTACTT GGTAAGAATA TATATAGCTT TGAAAGTAAA
ATATCCTCTA TTATCAAAAG CATGGTTATA TATATCAGTG TTGAAGACAG TGTGATAATA
AAAGAGTTAT CAAGTTTATT AAAGGATAAT GGCTCTACTG TTGTATTGAT TAATGTGCTA
CTACCTGATG ATCATGTGAC AATCCAATTA CCAAATAGTT TTTTAATTAC TCCTTTAATT
TTTATGCAAA TTTTCAAATT AAGTTGGGTA AGGGATATTG AAATTAATAG CATTACAAAT
GAACATATTT GA
|
|---|
| Protein sequence | MSQIFVHLRS HSDYSLLHGM VKIESLVNLC VQHNMPALAL TDSGNLFGSL EFSDCASNSG
IQPIIGCNIM ISYNGDNIGE LILLVKNQVG YSNIVNLVSN SFRNDQSGKI NRIDLNTLIS
LKDGIIVLTG GHDGFLAQLL LGNVIDYGII DKLLLAFKGN LYVELQRHNI EEEKLIERTL
IKFAYEKDVP LVATNDILFA RREDFLAHDV LSCISDGNYI AQEDRKMFTE EHYFKSSNEM
HELFVDIPEA ISNTVLIAQR CSFMPEIRKP MLPHFPCSSG RNESQELISQ AIDGLNSRLK
DSNLSKEQTS KYYERLHYEL DIIISMDYAG YFLIVSDFIC WSKRNDIMVG PGRGSGAGSL
VAWSLQITDL DPIEFGLIFE RFLNPDRISM PDFDIDFCQE GRDHVIEYVR KKYGYVAHII
TFGKLQAKAV LRDVGRVMQM PYFQVDRICK MIPHNPVRPV TLSEAIEMDK NLQKERDDDE
TVAKLLEISL KLEGLYRHVS IHAAGIVICD RRLEELLPLY YDNVSFLPIT QYNMKYTEKA
GLVKFDFLGL RTLTVINQIC HLVNNGGQNV DISRIPLNDK KTYEMLSAGD SVGVFQLESS
GMREVISKLK PDNINDIIAL ISLYRPGPMD NISIYIARKH GFEKPDYIHP ILEGVLKETF
GVIIYQEQVM EIAKIMAGYS LGEADLLRRA MGKKIKEEMD NQRRAFISGA INNGIEEEKA
SYIFDLVAKF AGYGFNKSHA AAYALISYQT AYLKANYTLE FFTASMNLDI TDKDKLEMLC
HQAKLHGIKI LPPDINTSKV FFTIEGSSSI RYALGALKNV GQHSAKEIVD DIAYKDIWDF
IDRVSTKCVH KRILESIIKA GVLDSIHSNR KQLFESVFLF LDIIEYNKYN ANFNQFSLFT
DRAHYKLSET DDWTKEEKLD NEFSSIGFYL NHHPMENYKC LLEKLNIGFI NYDDRSAYNN
RIVGIISSVK VRSASRDKFA VVTLSDPYNI HEIAFYNGSV IEDNKDLFTS GAPVIIEMDN
DFYSTAARLL GKNIYSFESK ISSIIKSMVI YISVEDSVII KELSSLLKDN GSTVVLINVL
LPDDHVTIQL PNSFLITPLI FMQIFKLSWV RDIEINSITN EHI
|
|---|
| |