| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0169 |
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| Symbol | rpoB |
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| ID | 3618368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia canis str. Jake |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007354 |
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| Strand | + |
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| Start bp | 248323 |
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| End bp | 252465 |
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| Gene Length | 4143 bp |
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| Protein Length | 1380 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637698110 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_302818 |
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| Protein GI | 73666802 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.410065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCTT CTGTAACTCC TACTAAATAT GTATTAAATT CTTTTAATTC AGTTCCTAGG
TTATCTTATG CTAAATCAAT AGATATAAAA GATTCTTTGA CTGATTTAAT AAAGATACAG
AGGGATTCAT ATAATGCATT TATTGGTGTA GGTCAGAATA CTGAGAGTGG TATAAAGAAT
ATTTTTGAAT CTATGTTTCC TATAGAGGAT TTATTAGGTA GGGCTGTTCT TGAATTTGTC
AGTTATAGTA TTGGTGAACC GCAATATGAT GAATATGAGT GTATAAAAAG AGGTATTACA
TTTTCTGTTC CTATACGTAT AGTGTTGCGT TTTATAGTGT GGAAGGTACA GGAAGTATCT
TTTAAGGAAG TAAAGTATGT AGTAGATGAA GAGACTTCAG AAAAGAGTAT AAAGTACATA
AAAGAACAGG AAGTTTCTAT AGGAGATCTT CCTACAATGA CTCCTCATGG AACGTTTATC
ATAAATGGAA TAGAAAGAGT AATAGTATCA CAAATGCATC GTTCTCCAGG GGTCTTTTTT
GATAGTGATA AAGGAAAAAC TTATAGTTCT GGAAAGTTAA TTTATTCAGC GAGGATTATT
CCTTACAGAG GTTCATGGTT AGATTTTGAA TTTGATATAA AAGATATACT TTATTTCCGT
ATTGATAGAA AGAGAAAGTT ACCAGTTTCT TTGCTTTTAA GAGCTTTAGG TTTATCTAAT
AATGATATTT TAAACACTTT TTATGATAAG ATACGTTATG TAAAATGTGA GAAAGGGTGG
ATAGTACCTT TTGTTGTTGA TAGGTTTAGA GGTGTTAGGC TATCACATGA TCTAGTTGAT
GTCAATGGTA ATGTATTGGT GAAAGCTAAT ACAAGAATTA CCTTAAGGAT GGCTAAAAAG
TTGGCTAATG ATGGGCTTAC AGAGTACTTG GTGCCATTTG CTGAAATTCA AGGGTTATTT
ATTGCTAATG ATTTGTTTGA TCCTAGTGGT AATGCTTTGA TTATATCTGC AGGTGAGAAT
ATTACTAGTG AACATATAAA TAAGTTAGAA TTATTTGATA TAAAAGAAAT CTTTGTTTTA
AATATAGATT TTCTAACAGT TGGTCCATAT ATTTTAAATA CTTTATTTTT AGATAAAAAT
GTAACTTATG AGGATGCACT TTTTGAGATA TATAAGGTTT TACGTTCTGG TGAATCACCT
AGTTTGGATA CGATAAAAGC TTTTTTTGAT GGATTGTTTT TTGAAAAAGA AAGATATGAT
TTATCTACTG TTGGAAGAAT AAAGTTAAAC GATCATCTTG GGTTAAATGT TAGTGAAGAT
ATTACAGTAT TGACTAAAGA TGATATAATT CATGTTATAA AAAAGTTAGT TCTGTTAAGG
GATGGTGAAG GTTCTGTTGA TGATATAGAT CACCTTGGTA ATCGTAGGGT AAGATCTGTT
GGTGAATTTA TTGAAAATCA ATTTAGAATT GGGATATTGA GACTTGAAAG AATGATTATG
GATTACATGT CTTCTGTAAA TTTTGATAAT GCAATGCCAT GTGATTTTGT AAATCCTAAG
ATTTTAGCTA CAGTTTTAAA AGATTTCTTT AGTTCTTCAC AGCTTTCTCA GTTTATGGAT
CAGACTAATC CGTTATCTGA AGTTACACAT AAGCGTAGAT TGTCTGCTTT GGGCCCTGGT
GGTTTGACTA GAGAAAGAGC AGGGTTTGAA GTTAGAGATG TACATCCAAC ACATTATGGA
AGAATTTGTC CGATTGAAAC TCCAGAAGGT CAAAATATTG GGTTAATTAG TAGTTTAGCT
ATCTATGCTC GTATTAATAA GCATGGGTTT ATTGAAAGTC CTTATAGAAA AGTTGATAAA
GGAGTTGTTA CTGATAAAGT TGAGTATTTA CTAGCTATGC AAGAAAGTAA TTATTATATA
GCAGATGCTA GTGCTACTCT TGATGAAAAC AATCAGTTTG TTGATGATAT GCTTTATTGT
AGGCATGATG GAAATTTTGT AATGGTTAAA AGGGAGGAAG TTGATTATAT AGATGTTTCT
CCAAAACAAA TTGTTTCAGT TGCTGCATCT TTAATACCTT TCTTGGAAAA TAATGATGCG
AACCGTGCTT TAATGGGTTC TAATATGCAG CGTCAAGCAG TTCCGCTATT GAAAGCAGAT
GCTCCTTTGA TCGGTACTGG TATGGAATCA ATAGTCGCTG CTGGATCTGG TACAGTTGTT
TTAGCTAAAC GTGGAGGTAT TGTTCATAGA GTAGATGGGT TGTATATAGT TATTCGTGCT
TTTGATCAAG AGAAAAATGA GTATTTGGGT GTTGATGTTT ATAATTTGAG AAAATTTCAA
CGTTCTAATC ATAATACTTG TATTAATCAG CGACCTTTAG TTAAACCTGG AGATTATGTA
AAAGCAAATG ATGTAATAGC TGATGGATCA GCAATTGATC AAGGTGAACT TGCTTTAGGT
AAAAATGTGC TAGTGGCTTT CATGTCGTGG CAGGGTTATA ATTTTGAGGA TTCAATAGTT
ATTTCAAGTG AAGTTGTAAA AAAGGATGTC TTTACTTCAA TACATATAGA AGAATTTGAA
TGTGTAGTTA GAGATACTAC ACTTGGTCCA GAAAAGATTA TGAGATCTGT TCCTGATATC
AATGAGGATA GTTTATCTCA TTTAGATGAT GTTGGTATTG TGAACATTGG TGCTGAAGTT
TCTGCTGGGG ATATTTTGGT TGGTAAAGTT ACTCCTCGTC CACCGATTTC TTTACCACCA
GAAACAAAGT TATTAGTGAC TATTTTTGGT GAAAAAGTAT TTGATTGTGT GGATTCTTCT
TTATATTTAC CTCTTGATGT TGAAGGTACA GTAGTTGATG TTCATGTTTT TGTACGTCGT
GGTGTTGAAG AAAATGACAG ATCTCTCTTA ATTAAGCAAA ATGAAATTAA TGGGTTCATA
AAAGAGAGAG ATTATGAAAT TGATGTAGTT AGTGAATATT TTTATGATGA ATTAAAGAGG
GTTTTAGTAA ATTCTGGTGT CCAATGTAAT AATCAGAATG TAAATGATTA TTTAGAATCT
ACTCCAAAAA AAGATTGGTG GAATGTTAAT TTGTCTGATG AGACTGTATT GTTACAGATT
AATAACTTAA GGGAAAAATT TGACTCAATG ATTCAAAATG CTCATAGTAA GTTTGATCAA
AAGATAGATA AGTTGAATTA TGGTTATGAT TTACCTCAAG GTGTTTTGTG TATAGTTAAA
GTTTTTGTTG CAGTAAAACA TAATCTGCAG CCAGGTGATA AAATGTCTGG TAGGCATGGT
AATAAAGGTG TAATTTCTCG TATTGTACCT GTTGAAGATA TGCCATATTT AGAAGATGGA
ACTCCTGTTG ATATTATACT TAATTCTTTA GGTGTACCTT CTCGTATGAA TGTTGGTCAA
ATTTTAGAAA CGCACTTTGG ATGGGCGTCT GTTAACTTGG GTAAAAAGAT AGGTCATATA
TTAGATAACA TTGATGAATT GACAATATCT CATTTAAGAA ACTTTTTAGA TCAAGTATAT
GATGGACAAG ATTTAAAGTA TAATATTCAG TCTATGAGTG ATGAGGACCT TTTGGCTTTT
GCAGAAAGGT TACGTGGTGG TGTACCAATG GCAGCTCCAG TATTTGAAGG GCCAAAGGAT
AGTCAGATTT CTAACTTATT AAAATTAGCT GATTTAGATG TTTCAGGACA AGTAGATCTT
TATGATGGAA GGATTGGTGA AAAATTTGAT CGTAAAGTTA CTGTAGGGTA CATATATATG
TTAAAGTTAC ATCACTTAGT TGATGATAAA ATACATGCAA GGTCTGTAGG TCCATATGGA
TTGGTTACTC AGCAACCTTT AGGTGGGAAA TCTCATTTTG GTGGTCAGCG TTTTGGAGAA
ATGGAATGTT GGGCACTGCA AGCTTATGGA GCTGCTTATA CTTTACAAGA AATGCTTACA
GTTAAATCTG ATGATATTGT TGGAAGGGTT AAAATTTATG AGTCTATCAT TAAAGGAGAT
AGTAATTTTG AGTGTGGTAT ACCAGAGTCG TTTAATGTGA TGGTGAAAGA GTTAAGATCA
TTATGTTTGG ATGTTGCTTT AAAGCAAGAT AAGGATTTCT TAAGTAGTGA AGTAAACAAT
TAA
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| Protein sequence | MSSSVTPTKY VLNSFNSVPR LSYAKSIDIK DSLTDLIKIQ RDSYNAFIGV GQNTESGIKN
IFESMFPIED LLGRAVLEFV SYSIGEPQYD EYECIKRGIT FSVPIRIVLR FIVWKVQEVS
FKEVKYVVDE ETSEKSIKYI KEQEVSIGDL PTMTPHGTFI INGIERVIVS QMHRSPGVFF
DSDKGKTYSS GKLIYSARII PYRGSWLDFE FDIKDILYFR IDRKRKLPVS LLLRALGLSN
NDILNTFYDK IRYVKCEKGW IVPFVVDRFR GVRLSHDLVD VNGNVLVKAN TRITLRMAKK
LANDGLTEYL VPFAEIQGLF IANDLFDPSG NALIISAGEN ITSEHINKLE LFDIKEIFVL
NIDFLTVGPY ILNTLFLDKN VTYEDALFEI YKVLRSGESP SLDTIKAFFD GLFFEKERYD
LSTVGRIKLN DHLGLNVSED ITVLTKDDII HVIKKLVLLR DGEGSVDDID HLGNRRVRSV
GEFIENQFRI GILRLERMIM DYMSSVNFDN AMPCDFVNPK ILATVLKDFF SSSQLSQFMD
QTNPLSEVTH KRRLSALGPG GLTRERAGFE VRDVHPTHYG RICPIETPEG QNIGLISSLA
IYARINKHGF IESPYRKVDK GVVTDKVEYL LAMQESNYYI ADASATLDEN NQFVDDMLYC
RHDGNFVMVK REEVDYIDVS PKQIVSVAAS LIPFLENNDA NRALMGSNMQ RQAVPLLKAD
APLIGTGMES IVAAGSGTVV LAKRGGIVHR VDGLYIVIRA FDQEKNEYLG VDVYNLRKFQ
RSNHNTCINQ RPLVKPGDYV KANDVIADGS AIDQGELALG KNVLVAFMSW QGYNFEDSIV
ISSEVVKKDV FTSIHIEEFE CVVRDTTLGP EKIMRSVPDI NEDSLSHLDD VGIVNIGAEV
SAGDILVGKV TPRPPISLPP ETKLLVTIFG EKVFDCVDSS LYLPLDVEGT VVDVHVFVRR
GVEENDRSLL IKQNEINGFI KERDYEIDVV SEYFYDELKR VLVNSGVQCN NQNVNDYLES
TPKKDWWNVN LSDETVLLQI NNLREKFDSM IQNAHSKFDQ KIDKLNYGYD LPQGVLCIVK
VFVAVKHNLQ PGDKMSGRHG NKGVISRIVP VEDMPYLEDG TPVDIILNSL GVPSRMNVGQ
ILETHFGWAS VNLGKKIGHI LDNIDELTIS HLRNFLDQVY DGQDLKYNIQ SMSDEDLLAF
AERLRGGVPM AAPVFEGPKD SQISNLLKLA DLDVSGQVDL YDGRIGEKFD RKVTVGYIYM
LKLHHLVDDK IHARSVGPYG LVTQQPLGGK SHFGGQRFGE MECWALQAYG AAYTLQEMLT
VKSDDIVGRV KIYESIIKGD SNFECGIPES FNVMVKELRS LCLDVALKQD KDFLSSEVNN
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