Gene Ecaj_0166 details

Gene Information

• Locus tag: Ecaj_0166
• Symbol: rplA
• ID: 3618365
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ehrlichia canis str. Jake
• Kingdom: Bacteria
• Replicon accession: NC_007354
• Strand: +
• Start bp: 246660
• End bp: 247322
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637698107
• Product: 50S ribosomal protein L1
• Protein accession: YP_302815
• Protein GI: 73666799
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0081] Ribosomal protein L1
• TIGRFAM ID: [TIGR01169] ribosomal protein L1, bacterial/chloroplast

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTCAT TGGTTAGTAA TGAAGTTTAT GATGTTGAGT CAGGTTTAAG AAAGGTTATA 
GAGTCTGCTA AAGCTAATTT TTGTGAGTCT GTGGATGTTG CAATAAATCT TAATATTAAT 
AGTTCAAAGT CTGATGAACA AGTTAGGGGA TGTGTTGTAT TGCCTAAGGG ATTAGGAAGA 
GAAGTGCGAG TTGCAGTGTT TGCTAAAGGT GGGCATTTAG AAATGGCTAG GGAAGCTATG 
GCTAATATTG TTGGGGATGA AGAGCTGATC GAAGAGGTAA AGAAAAAGCA GTGCAAGTTA 
GATGTAGATT GGTGTCTTAC TACTCCAGAT TTTATGGCAT CAGTTTCTTC TATTGCTAAG 
ATATTAGGTC CAAAGGGGTT AATGCCAAAT CCTAAATTTA ATACAGTAAC TTTTGAACTT 
GCTAAGGCTA TTAAAATAAT AAAGTCTGGT CAGATTAGAT TTAAGTCTGA TAAAACTGGT 
ATTGTGCATG CAAAAATTGG TAATGTTAAA TTTTCTATTG AGGATTTGTT GGAAAACTTT 
AATGCAGTAA TTAATGCAGT TAAGCAATGT AAGCCTGCTT CTATAAAAGG TTTATATTTT 
AAAGATGTAT TTGTTATTTC GACTATGGGG AAATCTGTTA AAGTAGAAAA TTTAAATAAT 
TAA 

 

Protein sequence

MSSLVSNEVY DVESGLRKVI ESAKANFCES VDVAINLNIN SSKSDEQVRG CVVLPKGLGR 
EVRVAVFAKG GHLEMAREAM ANIVGDEELI EEVKKKQCKL DVDWCLTTPD FMASVSSIAK 
ILGPKGLMPN PKFNTVTFEL AKAIKIIKSG QIRFKSDKTG IVHAKIGNVK FSIEDLLENF 
NAVINAVKQC KPASIKGLYF KDVFVISTMG KSVKVENLNN