Gene Ecaj_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcaj_0022 
Symbol 
ID3617558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia canis str. Jake 
KingdomBacteria 
Replicon accessionNC_007354 
Strand
Start bp25226 
End bp25930 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content30% 
IMG OID637697954 
ProductVirB8 
Protein accessionYP_302671 
Protein GI73666655 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3736] Type IV secretory pathway, component VirB8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAATA AATTTAAAAA AAAGAACAAC ACAAGTGATA ATAAAAAACC ATTAAAGGCA 
AATTTAGAAA CAACATATAG TTGGCATGTC AGTCGGTATA ATTCAGTTGT CATACAAAGG
AACATGCTAC TGTTTTTCAC AGTGCTGGCA CTAAGTGCAG TAGGAATTAG TGTTTTTGTC
ATCTCTAATA TAAGCAAAAG CAGGACTATT GAGCCATTTG TAGTAGAAAT AGAAAAGAAA
TCAGGAATTA CAACATTAGT AAATCCTGTA TCAGTTAAAC AATATTCAGC AGATGAAGTT
TTGAATAATT ACTTCATAAT AGAATATGTA AGATCTAGAG AACTTTTTGA CCCTAATAAT
TTCCAATATA ATTACTATAC AAAAGTTCGT CTATTTTCCA ACCAAACAAC ATATAGTGAA
TTTCGTAACT GGATAAGGTT AAGCAATCCT GCAAGTCCTT TGAACTTATA TGCAAATGTA
ACATCAGGAT ATCTAAAAAT TAGATCTTTA CAGCACTTGC GTCCAGGAAA TGTGCAAATA
AGATTTTCTT TAGAATTCAA CCATCCAAAT GGTACAATAA AAAGAGACAG AATAGCTACA
TTATCATTTC AATACGTAAC TCTTGAAATG AATGAACAAG AAAGACAAAT TAATCCTTTA
GGATTTCAAA TAACTTACTA TAGGGCAGAT GATGAATTTC TATAA
 
Protein sequence
MFNKFKKKNN TSDNKKPLKA NLETTYSWHV SRYNSVVIQR NMLLFFTVLA LSAVGISVFV 
ISNISKSRTI EPFVVEIEKK SGITTLVNPV SVKQYSADEV LNNYFIIEYV RSRELFDPNN
FQYNYYTKVR LFSNQTTYSE FRNWIRLSNP ASPLNLYANV TSGYLKIRSL QHLRPGNVQI
RFSLEFNHPN GTIKRDRIAT LSFQYVTLEM NEQERQINPL GFQITYYRAD DEFL