Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_B3759 |
Symbol | |
ID | 3617455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007349 |
Strand | + |
Start bp | 27473 |
End bp | 28123 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637695334 |
Product | hypothetical protein |
Protein accession | YP_300089 |
Protein GI | 73663843 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00249285 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATAA AGAAAAATAG TCATGTAAAA ACAACAGAAA TGAACAAGTA CCCCGTTTTG CAACTCAAAC GAGATCCTGA AGCAATTCAT CATTATCTGA ATGGAGAAAT CCGGATTTTA GTACCTACGG AATATCAGCG CATTAAAAAC GAAATCTCGC AGAAGCGCCA TCGAACTCTT TTTGACGTCC TCATGATCAC TGGTATGAGG TACGTTGAAG TTCAGAGACT CTGGGACCAT AAAGAATGGT ATCTAAAAAA GAAGAATATC ATTCATCTGC CAGAGGAAGC CCAGAAGAAA CACAAAAGAA CCCAGCAAGA AAGGACAATC CATCCTCTGC CAGGCATGTT TGAGCTTCTA TTAGATGACT TTTTTGAAGC CCGTAAACCG CCTGCAGAAA GCAACTGGAA TAGGGACCTA AGGAAATGGG CAAAGGATGC AGGCCTCAAC CCCTATGGCC TCTCAGCAAA AACAACAAGA AAGACCCTAG AAAGCTGGTG TATTGCTGCA GGCATGTTGG AATCTACAGT TTGCCTGCGC CAGGGACACG ACAACCTAAC CAGCATGAAG CACTACCAAG GTCTTGCTTT CTCAGCTGAT GAACTGAAAG ATATTGAAAA ACAGCTTACT GTCTGGGGAA TGTTGAAATG A
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Protein sequence | MPIKKNSHVK TTEMNKYPVL QLKRDPEAIH HYLNGEIRIL VPTEYQRIKN EISQKRHRTL FDVLMITGMR YVEVQRLWDH KEWYLKKKNI IHLPEEAQKK HKRTQQERTI HPLPGMFELL LDDFFEARKP PAESNWNRDL RKWAKDAGLN PYGLSAKTTR KTLESWCIAA GMLESTVCLR QGHDNLTSMK HYQGLAFSAD ELKDIEKQLT VWGMLK
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