| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_B3754 |
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| Symbol | |
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| ID | 3617450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007349 |
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| Strand | - |
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| Start bp | 15645 |
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| End bp | 21137 |
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| Gene Length | 5493 bp |
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| Protein Length | 1830 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637695329 |
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| Product | hypothetical protein |
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| Protein accession | YP_300084 |
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| Protein GI | 73663838 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.301903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAGTA AGTGTTTTTT TTTGCCAGTA ATCGTTGGAA TATCGTTACT TGTTTCAGGC
GTTCAAGCAG CACCTGTAAC AAATGGACTG GTTGTTTATT ATGATGGCAA TTTATCAGGG
AGTTTCCTGG TGGATCTCAG CGGAAACAAT AATACCGGCT ATGCCACGAA TGTAACTTCA
GGGACAAACC AGTTAACTGG TGCGAATTAC ATAAACCTTA ATGGTTTCAA TAGTAGTATA
GATGTTTCTA ATAATGCTCA GACTAACATT TCCAGTCCTA TATCGATTGA GTTCATAGGA
TCAATTCATG AATTCAAGCC CTATGGGGCA CTTGTGAGCA AGTACGACGA TGACGAAATA
ACTGGCTGGT ATTTGGATTG TTCGGCTCAC CCTCCTTACC AGCAAGCTCG TTTTGTTATG
TGTGCGTGGA ATGCAACTTC AGGGACTAAC AGTTTATATG GCGATAAATC GGTTGGTACT
CTTGATGCCG GGCAGATATA TCATATTGTA GTAACTTATG ATAGCAACAC TGCCAGCATT
TATATCAACG GTGTAAATTC AGGTACTAGT ACTTGGAATT TACCGATAGT AGGAAATTCT
AAAAATATCA CCATAGGCTC CGGTTCTGGA ATTCCCAACG GTAACTGCAG TATGTACGTT
TTTAGGCTCT ACAACAGGGC ACTGTCCCCG GATGAAGTTT GGCAAAATTA CGTTAGGGAT
CGCCCGATAT ATATGATGAC TCCGACTATT ATCTGGAGTA ACCCTGCTGA TATTACCTAT
GGAACAGCAT TAAGCAGTAC TCAGTTAAAC GCAGTTGCAA CTGATCCTGT AACTGGAAAT
ACGGTAACTG GTAACTTTAC TTATGATCCA GCAGCAGGAA CTATCCTTAG TGAAGGGACT
CAGACATTAA ATGTTGATTT CGCGTCTAAT GATACTGCAA ATTACACTAA CGCAACAGCG
AATGTTACAA TCAATGTGAA TCCAGTACCT CCAGTAGCGA ACTTTAGTTA TGCTATGGTT
AACAATTCTC CCCTGACTAT TCAATTTACT GATACGTCGA TTAGCGGGGT AAATTATCAA
TGGAACTTTG GAGATGGAAG TTCAAATGTT ACTCTAGCAA ATCCGTTACA TACTTTTGCC
TCACCTGGTG CTTACTCTGT ACAGGAAACA GTTTCGAATG CTTTGGGATC CAGCACGAAA
ACACAAAATG TTGATGTTCA ATATCCAACC ACAAATCTTG ACGTAGGCGA ACTGCAACTT
TGGACATTCG ATGCAAGTAA AGTAAGTGAT GTTCCAAACA ACATTTACAC GACTACAAAA
AACATTCCAT ATACCTCAAA CGTGAGTCTC AAGCACAATT CAACATTAGG TTCTATTGAC
TCTAGCTGTT GGCATGGTGA TAATGGGGAA ACCTACATTA CTGGTGCATA TCCCACTGTT
AATCAAAATT TGACATTTAC AATGGGCATA GATTCTAATT CACAATGGTC ATACGGGTAC
CTGCATACTT CAGTTGCCGA CATTGGCGTC AGACATGCTT CAGATGGTAG TTACTGGATC
TATTCTTACT GGACGAATGA TACAGGCAGC CAGTTAAGTT CTAGTTATCA GATTCCCGCA
ACTTCAGTTG TCAACAATAA AGTTACAGTT AGCATTCACA GTTACGACTC AAACCGTACA
AATGTTATTA CGTCTGGGCC TGCATTGTAC GTTATTACTC CTTATACAAC TGAAAAAACG
CGGAAACTAC CCTATACAAA CGTAATTCAG CCTTTGATCT ACGAAACCTT TTATGCATCA
GGTACAGACG GTTGGGTGAA TGTGCACCTC TATAACATTA CACAATCAAT ACCGAGAGAC
ATTATCACCC CATATGCCCG AAATGACATA ATGGCATTCG GGCTTGTCTG TCCGAATGTT
ACCAATAATC AGCTCGGTAC AGATTTCTTA ATTTCACATA ATCAGAGCGC TACGGTTTTT
GTTTCAGGGG GTGTGGATGA AAATGAGGTT GAGTATAATG AATATCTATT TAACCATGGA
TTTGAAGAAG GCATTCATTT TTATCCCGGG CTTGCGTCAC AATCATTAGC AGATTCAGAA
ACAATAATTG ATACTGAAAT GGATCATGTT AATTCGCTTT TTGGAGCAAT GCCTGCATCA
TGGTCGTCAC ATGCAAATGA TGACAACATC ACGCATGCTA TCTATATATA CCAGAGATAC
GGTGCTCTTT ACAGAACCGG TTACCAGGGT ATGGGATTTA TTTCGAATTC GATCAACCTT
CAAAATAACA CATGGTATTG GTGGAATATT TCGTCAGCAC GTGGAGCGAT ATCTCCATGT
TTTACACATC AGACAGACAT AGACCCAGCA CCACTATTCG CGATAGATCC AGACTTCTTC
AGTACATTTG TGACTAACCT GAATTCAAAT GGTATCAACC TAGTTGGTTT CACAAACTGG
TATTGTAGCT CGATGGCACA GACTGCTATC ACTAACGTTC TACAATATGA TGAGAATAAT
ATAAAGTTTC AGTTAAACAC AAGTGGTGGA TATCCGGTCA ATATGAATGT ACAGACTATG
AGTTCTCCTT TATACCTGTA TTGTGATGCT GTGTCAATAC CATTCAACCA AACGTCTGAT
GGCATCCAGT TTATGAGTGT TGGTAATGGA ACATACACTT TGACAAACAC ATCGTTGGCA
ACACCGTCAA TTACGTGGAG TAATCCGGGT GCCATAACAT ACGGAACTGC TCTTTCAAGT
ACTCAGTTAA ATGCAACTGC CTCAGTACCA GGGACACTTG CGTATCATCC AGCAGCAGGA
ACTATCCTTA GTGCAGGGAC GCATCCTTTG CAGGTAATAT TCACGCCTAC TGATTCCACT
AACTACACCA CGGCTACAAG TAGCGTTTCA TTAGCCGTAA ATAGAGCTAC ACCTTTGATA
ACTTGGAATA CTCCTTCAGC AATAAGTTCT GGTACTTCTT TAAGTGAAAC TCAGTTAAAT
GCAAATGCTT CGGTGCTTGG TAACTTTACT TATAATCCAG CTTCAGGGAC AGTTCTTAGT
GTAGGGACTC ATACTTTACA TGTTGATTTT ATGCCTACCG ATGTTGTAAA TTACACTAAC
GCAACAGCGA ATGTTACAAT CAATGTTTCA GAAAAGCTAG TTTTACCTGT TGCAAACTTT
ACTGCTAGTG TTACTAGCGG TGCTGCTCCC CTCTCAGTTC AGTTTAATGA CAGTTCGGAA
AATGCAACAG CTTGGTCCTG GGACTTTGGA GATGGCCAGA CATCTACGGT TCAGAATCCG
AGTCATACTT ATAGTATCCC TGGAACTTAC ACCGTTAGTT TGAATGTAAG TAATGCTGAT
GGTTATAATA TCTCGACAAA ATCAAATTTA ATTACTGTAA ACCCAAATAC ACCACCTGTA
ACAAATGGAC TGGTTGTTTA TTACGATGGT AGTTTATCAG GAAATTCCCT GGTGGATCTC
AGCGGAAACA ATAACATTGG CTATGCCACG AATGTAACTT CAGGGACAAA CCAGTTAACT
GGTGCAAATT ACATAGACCT TAATGGTTTC AATAGTAGTA TAGATGTTTC TAATAATGCT
CAGACTAACA TTTCCAGTCC TGTATCAATT GAGTTTATAG GGTCAATTAA TGAATTCAAG
GAATTAGGAA CACTTGTGAG CAAGTACAAT GACGAGAAAA CTGGTTGGTA TTTGAGTTGT
TCGACTGCTG ATCCTAACAA TCATCTTCGT GTTGCTCTAG GTTTGCAGAG TGGCGCTCTG
AATATGTATA ACTCGGATGC GAGTCTTGTT GCTGGTCAGG TATATGATAT TGTATTGACT
TACGATAACA ACACTGTCAG TGTTTATATC AATGGTGTAA ATTCAGGTAC TCGTACATGG
AATTCACCAA TAGCAGGGCT TACTAACAAT ATCAGCATAG GCTCCGGTAC TAGAAATTTA
TCCTACGGTA ACTGTAGTAT GTATGCTTTT AGACTCTACA ATAGGTCGCT GTCCTCGGCT
GAAGTTTTAC AAAATTATAA TAGTGATCAT TGGAGATATA GTGAATATAC AACTAAGGTA
TCGCCTACAA TAATCTGGGC CGGCTCTGTT GCTATAACTT ATGGTACAGC TTTAAGCGAG
GCTCAACTAA ATGCAAATGC TTCTGTTCCT GGCACTTTTG TATATAGCCC TGCTTCTGGA
ACGATTCCAG GAGCTGGTAC TCATACCCTA CAGACCACTT TCACGCCTAC CGATACTACA
AATTATACCA TGGCCTCAAG CAGTGTTTCA TTAACCGTAA ATAAAGCTAT ACCTTTGGTA
ACTTGGAGTA ACCCTGCTGA TATAACAAGT GGAACAGCAT TAGGCAGCAC TCAGTTAGAT
GCTTTTGCTT CAGTACCAGG GTCTTTTGCC TATAATCCTG TATCTGGAAC GGTTCTTAGA
ACAGGGACTC ATGCTTTAAA GGTTAGGTTT ACTCCTGCTG ACACTACAAA CTATACCACA
GTCTCAAATA GTGTTTCATT AACTGTGAAT AAAGCTATAC CTTTGATAAC TTGGAGTAAC
CCTGCTGACA TAACAAGTGG AACAGCATTA AGCAGCACTC AGCTAAATGC AAATGCTTCA
GTCCCTGGTA CTTTTGTCTA TACACCAGCA ACAGGAACTG TACTCAATGC AGGAACTCAT
ACATTACATG TTGATTTTAC ACCTGCTGAT ACTGCAAGTT ATAAGTCTGC CTCAAAGGAT
GTTACAATCA ATGTAGTTAG CCAGAAAATG ATTCCTATAA TTACCTGGAA TACTCCTGCT
GACATAACCT ATGGTACAGC GCTGGATAGC GCTCAATTAA ACGCATTGGC TTCAGTACCA
GGCTCTTTTG CCTATACTCC AGCTTTGGGG ACAGTCCTCA GTGCGGGGAT GCATAATTTA
TCTCTTGATT TCACTCCTGC CGACTTGAAA AACCATACCA TGGCTTCAGG CAGTGTTTCG
TTAATAGTGA ATAAGGCTGC ACCTTTGATA ACCTGGAATA ACCCTGCTGA TATGTCCTCT
GGCACTTCCC TAAGTGAAAC TCAGCTAAAC GCAGCTGCAT CTGTCCCGGG CTCTTTTGCA
TACACTCCAG CCGCTGGAAC GATACTTAGT GCAGGGACTC ATACATTACA AGTTACGTTT
ACTCCGACTG ATACGGCTAA TTATATTCCA GCTTCCAGTA GTGTCTTAAT AAATATTGTA
AATGATGCTC ATGCTAAGAG TTCTTCCAGT AATAAAAAAT ATAATTTGGT AAAACAAAAA
ATACTGGCAC CTAATTCTAC ACAATCTTCG AATTTAACTG AAGGTATTGA AAAGGAAATA
AAGTCCGAAT TAGGAAATGA AGCGATTGAT CAACACAATA AGTCGAGTAA AGGACTACAA
ACCGAACAGA AAGAAACCCA GAACACACCT GGCTTTGGAA TAGCTTGCGG GGTGGCTTGT
CTGTTTGGAG TGCTCCTGTA TAAAAGAGAG TAA
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| Protein sequence | MVSKCFFLPV IVGISLLVSG VQAAPVTNGL VVYYDGNLSG SFLVDLSGNN NTGYATNVTS
GTNQLTGANY INLNGFNSSI DVSNNAQTNI SSPISIEFIG SIHEFKPYGA LVSKYDDDEI
TGWYLDCSAH PPYQQARFVM CAWNATSGTN SLYGDKSVGT LDAGQIYHIV VTYDSNTASI
YINGVNSGTS TWNLPIVGNS KNITIGSGSG IPNGNCSMYV FRLYNRALSP DEVWQNYVRD
RPIYMMTPTI IWSNPADITY GTALSSTQLN AVATDPVTGN TVTGNFTYDP AAGTILSEGT
QTLNVDFASN DTANYTNATA NVTINVNPVP PVANFSYAMV NNSPLTIQFT DTSISGVNYQ
WNFGDGSSNV TLANPLHTFA SPGAYSVQET VSNALGSSTK TQNVDVQYPT TNLDVGELQL
WTFDASKVSD VPNNIYTTTK NIPYTSNVSL KHNSTLGSID SSCWHGDNGE TYITGAYPTV
NQNLTFTMGI DSNSQWSYGY LHTSVADIGV RHASDGSYWI YSYWTNDTGS QLSSSYQIPA
TSVVNNKVTV SIHSYDSNRT NVITSGPALY VITPYTTEKT RKLPYTNVIQ PLIYETFYAS
GTDGWVNVHL YNITQSIPRD IITPYARNDI MAFGLVCPNV TNNQLGTDFL ISHNQSATVF
VSGGVDENEV EYNEYLFNHG FEEGIHFYPG LASQSLADSE TIIDTEMDHV NSLFGAMPAS
WSSHANDDNI THAIYIYQRY GALYRTGYQG MGFISNSINL QNNTWYWWNI SSARGAISPC
FTHQTDIDPA PLFAIDPDFF STFVTNLNSN GINLVGFTNW YCSSMAQTAI TNVLQYDENN
IKFQLNTSGG YPVNMNVQTM SSPLYLYCDA VSIPFNQTSD GIQFMSVGNG TYTLTNTSLA
TPSITWSNPG AITYGTALSS TQLNATASVP GTLAYHPAAG TILSAGTHPL QVIFTPTDST
NYTTATSSVS LAVNRATPLI TWNTPSAISS GTSLSETQLN ANASVLGNFT YNPASGTVLS
VGTHTLHVDF MPTDVVNYTN ATANVTINVS EKLVLPVANF TASVTSGAAP LSVQFNDSSE
NATAWSWDFG DGQTSTVQNP SHTYSIPGTY TVSLNVSNAD GYNISTKSNL ITVNPNTPPV
TNGLVVYYDG SLSGNSLVDL SGNNNIGYAT NVTSGTNQLT GANYIDLNGF NSSIDVSNNA
QTNISSPVSI EFIGSINEFK ELGTLVSKYN DEKTGWYLSC STADPNNHLR VALGLQSGAL
NMYNSDASLV AGQVYDIVLT YDNNTVSVYI NGVNSGTRTW NSPIAGLTNN ISIGSGTRNL
SYGNCSMYAF RLYNRSLSSA EVLQNYNSDH WRYSEYTTKV SPTIIWAGSV AITYGTALSE
AQLNANASVP GTFVYSPASG TIPGAGTHTL QTTFTPTDTT NYTMASSSVS LTVNKAIPLV
TWSNPADITS GTALGSTQLD AFASVPGSFA YNPVSGTVLR TGTHALKVRF TPADTTNYTT
VSNSVSLTVN KAIPLITWSN PADITSGTAL SSTQLNANAS VPGTFVYTPA TGTVLNAGTH
TLHVDFTPAD TASYKSASKD VTINVVSQKM IPIITWNTPA DITYGTALDS AQLNALASVP
GSFAYTPALG TVLSAGMHNL SLDFTPADLK NHTMASGSVS LIVNKAAPLI TWNNPADMSS
GTSLSETQLN AAASVPGSFA YTPAAGTILS AGTHTLQVTF TPTDTANYIP ASSSVLINIV
NDAHAKSSSS NKKYNLVKQK ILAPNSTQSS NLTEGIEKEI KSELGNEAID QHNKSSKGLQ
TEQKETQNTP GFGIACGVAC LFGVLLYKRE
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