Gene Mbar_B3748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_B3748 
Symbol 
ID3617464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007349 
Strand
Start bp9116 
End bp10192 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content31% 
IMG OID637695324 
Productglycosyl transferase 
Protein accessionYP_300079 
Protein GI73663833 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.985214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAGGG TTTTAATGTG TGGATCTGTA GCTTCCTCAG GTGGGGTTTC TACACATACT 
AAGAACTTAA TTGAAAATTT GTCTGTTGAA GATAATGAAA TATTATTGTA TAATTATCAT
GCAAACAAAG CTAACTCAAA AAATACAAAC TTCGAAAAGG TATATCGGCG CACTTTTGGA
TTATTTTTTC AGATCATATC TAACAGAAAG AAATACGAAA TAATTCATGA CCAAACATCG
GGTGGTATAT TTAGTTTCAT TTCCTCAATA ACTGCATCCA TTGCATCAAA GATTGTAGGC
AAAAAGTTAA TTGTCACATT TCATCATTCA AAAACAGAAG AATTTGTGAG AAAATATAAA
GCTTTTTTCA GCTTTGTTTT AAAAAATACA GATACAATGA TTTTAGTTTC AAATAGACAA
AAAGAGTTTA TCTCCAAGAC TTTCCCGCAG TACTCAGATA AATTAGTTGT AATTCCAAAT
GGTTATGATT CAACTTTCTT TTTCCCAAGA AATACTGATG AATGTCGATC CGTTTTAAAT
ATTCCTATGA ATAGAAAGGT GATATTTAAC ATTTCAAACT TAATTGACAT AAAAGGACAT
AGGTATCTTA TTGAGGCAAT TGGCAAAATT GTGAAAACCA GATCTGATAT TTACTGTGTT
ATTGCAGGAA AAGGTTATCT ATTAGAAACT CTAGAGCAAC AAATCAAAAA TTCTAAACTT
GAGGACTATA TAAAATTAGT CGGATGGATA CCTGACGAGA AAATTCCAAT TTATATAAAC
ACAAGTGATT TCTTTGTTCT TCCAAGTTTA GGTGAGGGAA ATCCTATTGT TATGTTTGAA
ACAATTGGGT GTGGAAGACC ATTTATAGGA ACGAAAGTCG GGGGAGTTCC TGAAATAATA
AACTCTGAAG ACTATGGATT ATTATGTGAA CCTGCAAGTT CAGAAGAACT TGAAAAGACT
ATAATGTCAG CTTTAAATAA AAATTGGGAT AGTTTTAAAA TCAGAGAGTA TGCTGAATCT
TTTACTTGGA GAAATATTGC AAAAACAACT AAGCATGTCT ATGAACAATC TACGTGA
 
Protein sequence
MVRVLMCGSV ASSGGVSTHT KNLIENLSVE DNEILLYNYH ANKANSKNTN FEKVYRRTFG 
LFFQIISNRK KYEIIHDQTS GGIFSFISSI TASIASKIVG KKLIVTFHHS KTEEFVRKYK
AFFSFVLKNT DTMILVSNRQ KEFISKTFPQ YSDKLVVIPN GYDSTFFFPR NTDECRSVLN
IPMNRKVIFN ISNLIDIKGH RYLIEAIGKI VKTRSDIYCV IAGKGYLLET LEQQIKNSKL
EDYIKLVGWI PDEKIPIYIN TSDFFVLPSL GEGNPIVMFE TIGCGRPFIG TKVGGVPEII
NSEDYGLLCE PASSEELEKT IMSALNKNWD SFKIREYAES FTWRNIAKTT KHVYEQST