Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_B3743 |
Symbol | |
ID | 3617459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007349 |
Strand | + |
Start bp | 2036 |
End bp | 2938 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637695320 |
Product | transposase |
Protein accession | YP_300075 |
Protein GI | 73663829 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCAGTTT TTATTTCAAG AAGGACCAAG CAGGTTGAGC CTGCCTTCAC TCGATTTTTC CGAGAGAAGA ACGGCTTTCC TAAGTTCAAA TCTAAGAAAA ACTCAATTCA ATCTTTTCCT ATACCTCAAC ACTACTCCGT AGACTTTGAA AAAAACACTA TCAAGCTCCC TAAAATAGAA CCAGTTAAAG CAGTTTTTCA CAGGAAGTTT GAGGGCGAGC TTAAAACAGC TACTGTTTCA AGGACATGTA AAGGACATTA CTACATTAGT ATCCTTGTTG AAGATGGGAA CGAACTTCCT ACAAAACAGA AGTATTCAGA ATCTACTACA GTGGGTCTAG ATGTCGGGAT TAAGGATTTT GCTATACTTT CCACAGGAGA AACGATTGAG AATCCTAACT ACCTGAAAAA CTCTTTGAAC AGGTTAAAGG TTCTTCAAAA AAGAGTATCA AGGAAACAGA ACGGTTCTAA GAACAGGGTA AAAGCCAAAC ATAGGCTTGC TGTACTACAT GACAAAATAA CTAATCAGAG GAACGACTTC CAGAACAAAC TCTCTTTTAA ACTCATAAGC GAAAACCAAG CAATAGCTCT GGAAACTCTG AATGTTAAAG GAATGGTCAA GAATCATCAT TTGGCACAGG CTATAAGTGA TTCCGCATGG AGCAGTTTTG TAACAAAACT AGAGTATAAA ACTGAATGGT ACGGAAAAAC CATCCTGAGA ATTGGGCAAT TTGAACCATC TTCTAAAGTA TGTCATGTTT GTGGATATCA TAATTCAAAT TTGACATTAA AAGATAGAGA ATGGACTTGC CCAGACTGTA AAACAAAACA TGATAGAGAT ATAAATGCCG CTATCAATAT CAAGAAATTT GCTCTCATAG ATCAAAATCT AATTGGATTA TAA
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Protein sequence | MSVFISRRTK QVEPAFTRFF REKNGFPKFK SKKNSIQSFP IPQHYSVDFE KNTIKLPKIE PVKAVFHRKF EGELKTATVS RTCKGHYYIS ILVEDGNELP TKQKYSESTT VGLDVGIKDF AILSTGETIE NPNYLKNSLN RLKVLQKRVS RKQNGSKNRV KAKHRLAVLH DKITNQRNDF QNKLSFKLIS ENQAIALETL NVKGMVKNHH LAQAISDSAW SSFVTKLEYK TEWYGKTILR IGQFEPSSKV CHVCGYHNSN LTLKDREWTC PDCKTKHDRD INAAINIKKF ALIDQNLIGL
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