Gene Mbar_B3743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_B3743 
Symbol 
ID3617459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007349 
Strand
Start bp2036 
End bp2938 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content36% 
IMG OID637695320 
Producttransposase 
Protein accessionYP_300075 
Protein GI73663829 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCAGTTT TTATTTCAAG AAGGACCAAG CAGGTTGAGC CTGCCTTCAC TCGATTTTTC 
CGAGAGAAGA ACGGCTTTCC TAAGTTCAAA TCTAAGAAAA ACTCAATTCA ATCTTTTCCT
ATACCTCAAC ACTACTCCGT AGACTTTGAA AAAAACACTA TCAAGCTCCC TAAAATAGAA
CCAGTTAAAG CAGTTTTTCA CAGGAAGTTT GAGGGCGAGC TTAAAACAGC TACTGTTTCA
AGGACATGTA AAGGACATTA CTACATTAGT ATCCTTGTTG AAGATGGGAA CGAACTTCCT
ACAAAACAGA AGTATTCAGA ATCTACTACA GTGGGTCTAG ATGTCGGGAT TAAGGATTTT
GCTATACTTT CCACAGGAGA AACGATTGAG AATCCTAACT ACCTGAAAAA CTCTTTGAAC
AGGTTAAAGG TTCTTCAAAA AAGAGTATCA AGGAAACAGA ACGGTTCTAA GAACAGGGTA
AAAGCCAAAC ATAGGCTTGC TGTACTACAT GACAAAATAA CTAATCAGAG GAACGACTTC
CAGAACAAAC TCTCTTTTAA ACTCATAAGC GAAAACCAAG CAATAGCTCT GGAAACTCTG
AATGTTAAAG GAATGGTCAA GAATCATCAT TTGGCACAGG CTATAAGTGA TTCCGCATGG
AGCAGTTTTG TAACAAAACT AGAGTATAAA ACTGAATGGT ACGGAAAAAC CATCCTGAGA
ATTGGGCAAT TTGAACCATC TTCTAAAGTA TGTCATGTTT GTGGATATCA TAATTCAAAT
TTGACATTAA AAGATAGAGA ATGGACTTGC CCAGACTGTA AAACAAAACA TGATAGAGAT
ATAAATGCCG CTATCAATAT CAAGAAATTT GCTCTCATAG ATCAAAATCT AATTGGATTA
TAA
 
Protein sequence
MSVFISRRTK QVEPAFTRFF REKNGFPKFK SKKNSIQSFP IPQHYSVDFE KNTIKLPKIE 
PVKAVFHRKF EGELKTATVS RTCKGHYYIS ILVEDGNELP TKQKYSESTT VGLDVGIKDF
AILSTGETIE NPNYLKNSLN RLKVLQKRVS RKQNGSKNRV KAKHRLAVLH DKITNQRNDF
QNKLSFKLIS ENQAIALETL NVKGMVKNHH LAQAISDSAW SSFVTKLEYK TEWYGKTILR
IGQFEPSSKV CHVCGYHNSN LTLKDREWTC PDCKTKHDRD INAAINIKKF ALIDQNLIGL