Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_B5883 |
Symbol | |
ID | 3614536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007348 |
Strand | - |
Start bp | 2723594 |
End bp | 2724022 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637695315 |
Product | Type III secretion system outer membrane O protein |
Protein accession | YP_300070 |
Protein GI | 73539703 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.6073 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGACG GCATCGAGGA CAAGCCGGTC GATCCGATGG ACGACTGGGC CAGCGCGCTG GCGGAACAGA CCAGCGCCAC TGCGGCCGAA GCCCCGGTAG CGGCCGCCAT CCCGGCCGCC GCCACCGTTT TCCCGCCGCT GGCCAAGGAA GCACCGAGCG GCTTCCAGAA CGATATCGAG ATGATCCTCG ATATCCCGGT ACAGCTCACG GTCGAGCTTG GCCGCACCAA GGTGCCCATC AAGAACCTGC TACAGCTTGC GCAGGGATCC GTGGTGGAAC TGGACGGCCT GGCCGGCGAG CCGATGGACG TGCTGGTCAA CGGCTACCTG ATTGCGCAGG GTGAGGTGGT GGTGGTGAAC GACAAGTTTG GCATTCGCCT GACGGACATC ATCACGCCGT CCGAACGCAT CCGCAAGCTC AACAAATGA
|
Protein sequence | MTDGIEDKPV DPMDDWASAL AEQTSATAAE APVAAAIPAA ATVFPPLAKE APSGFQNDIE MILDIPVQLT VELGRTKVPI KNLLQLAQGS VVELDGLAGE PMDVLVNGYL IAQGEVVVVN DKFGIRLTDI ITPSERIRKL NK
|
| |