| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5827 |
|---|
| Symbol | |
|---|
| ID | 3614167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 2655507 |
|---|
| End bp | 2657846 |
|---|
| Gene Length | 2340 bp |
|---|
| Protein Length | 779 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637695259 |
|---|
| Product | DEAD_2 |
|---|
| Protein accession | YP_300014 |
|---|
| Protein GI | 73539647 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1199] Rad3-related DNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCCGCCA CCCAAACCGC CCCACCCCGC TACACCGTCG CCGTTCGCAC CTTATGCGAA
TTCACCGCCA AGGCCGGGGA CCTCGACCTG CGCTTCACGC CGTCGCCCAC GGGGCAGGAA
GGCGTTGCGG GCCATGGCGT GGTCACCAGC CGCCGCGGGC CGGGCTACGA GTCCGAGGTA
ACGCTGTCGG GTGAATTCGA AGGCCTGCGC GTCCGCGGCC GTGCCGATGG CTACGATCCC
GTGGCGAACC GCGTCGAGGA AATCAAGACC ATACGCGGCG ACAAGGCCGA GATCCCGCAG
AACCATCAGG CGCTGCACTG GGCGCAGGCA AAGATCTACG GGTGGCTGCT ATGCGAAGCC
CGCAATCTGC AGAAGATCGA CGTGGCGCTC GTGTATTTCG ACATCCTGAG CCAGCGCGAA
CGCGTGCTGA AGGAACGCTA TGACGCCGCG ACGCTGCGTG CCTTCTTTGA AGACAGCTGC
CGCCGCTTCA TGCACTGGGC CGAGCGTGAA ATCGCGCATC GAAGCGATCG CGATGCGGGC
CTGCAGGCGC TGGCCTTTCC CCATGGCACA TTCCGCGACG GCCAGCGCCT GCTGGCGGAG
TCGGTCTACA AGGCCAACGC CTCGGCACGT ACGCTGCTGG CGCAGGCGCC TACCGGCATC
GGCAAGTCGA TCGGCACGGT GTTTCCGGCC TTAAAGGCCA TGCCCGCGCA GCGCATCGAC
AAGATCTTCT TCCTGTCCGC ACGGTCGACG GGCCGCGCCG TCGCGCTGCA GGCCACTGCA
CAACTGCGCG GCAAGCCCGA CGATGCGCCG CTGCGCGTGC TGGAACTCAC GTCGCGCGAC
AAGGCCTGCG AGCATCCTGA TCTGGCCTGT CACGGCGAAT CCTGCCCGCT GGCGCAAGGC
TTCTATGACC GGTTGCCAGC GGCGCGCGAT GCCGCGAGCC GCGTACCGCT GCTGGATCGC
CACGCCGTGC GCGAGATCGC CCGTACGCAT GCGGTGTGCC CGTATTACCT CACGCAGGAG
ATGATCCGCT GGAGCGATCT CGTGGTGGCC GACTACAACT ACTATTTCGA CCGCAGCGCG
ATGCTGTATG CGCTGACCGC GCTGAACGAA TGGCGCGTGA GCGTGCTTGT GGATGAAGCG
CACAATCTGG TCGAACGCGG CCGCACCATG TACACCGCCA CGCTGGACCA CGCGGCGTTC
CGCGGCGTGC GGCTGTCCGC GCCAGGTGCG TTGAAGTCGA AGATGAACAA GGTCTATCGG
CAGTGGAACA CGCTGGCCAA GCGGAGCAAG GCGGAGTACG AAACGCACGA CGAAGAGCCC
GCGGCATTCA TTGAAGCGCT GACGCAGCTG TGTACTGCCA TCATCGACGA CATGAGCGAG
CATCCGCAGC GGCACGACGC CACGCTCGAA CGCTTCTATT TCGATGCGAT GCACTTCTTG
CGCCTGGCGG AGCAGATGAC GGAGTACGGC GGCAAGCATT CGCTGTTCGA TATCACGCGC
ACACCGCGCG GCTGTTCCGG CGTGGATGCC GCGCTGTGCG TACGCAATCT GTTGCCTGCG
CCTTATCTCG CGCCGCGCTT CGCGGGCGCA CATTCGACCA CGCTGTTTTC CGCCACGCTG
CAGCCGGCCG ACTATTACCG CAACCTGCTT GGCATGCCTG CCAGTGCGGT GTGGGTCGAA
GTGCCCTCGC CGTTCCAGCC CGAGCAGCTC GACGTGCACG TCGCACGCCA TATCTCCACG
CGCTATTCCC ACCGGCAACG CTCGCTGCCG GCAATCGTGG AACTGATTGC CGGCCAGTAC
GCGCGGCGTC CCGGCAACTA CCTGGCCTTC TTCAGCAGCC ATGATTATCT GCAGCAGGCC
GCGGCGCTGC TGGCCGAGTG CCATCCCGAT ATCCCGATCT GGTCTCAGGC ACGCGGCATG
ACCGAGGCCG GCCAGGCCGC GTTCCTCGAC GCGTTTGCGC CGGGCGGCTG CGGTATCGGC
TTTGCGGTGC TTGGCGGCGT GTTCTCCGAA GGCGTGGATC TTCCGGGCGA CCGGCTGATC
GGCGCGTTCG TGGCCACGCT GGGGCTGCCC CAGGTGAACC CGGTCAACGA ACAACTGCGC
GAACGGATGG ATGCCGCATT CGGCCGCGGC TATGACTACG CCTACCTGTA TCCGGGCCTG
CGCAAGGTCG TGCAGGCAGC CGGCCGCGTG ATCCGCACCC GAGAGGACCG CGGCGTGGTG
TGGCTGATCG ACGATCGTTT TGGGCGGCCG GAAGTGCGGG AAATGTTGCC GGCATGGTGG
GAGATATCAC CGATGGATGA TCGGCAACGC AACGTTCGCG AACGACAGCC CGGATCCTGA
|
|---|
| Protein sequence | MSATQTAPPR YTVAVRTLCE FTAKAGDLDL RFTPSPTGQE GVAGHGVVTS RRGPGYESEV
TLSGEFEGLR VRGRADGYDP VANRVEEIKT IRGDKAEIPQ NHQALHWAQA KIYGWLLCEA
RNLQKIDVAL VYFDILSQRE RVLKERYDAA TLRAFFEDSC RRFMHWAERE IAHRSDRDAG
LQALAFPHGT FRDGQRLLAE SVYKANASAR TLLAQAPTGI GKSIGTVFPA LKAMPAQRID
KIFFLSARST GRAVALQATA QLRGKPDDAP LRVLELTSRD KACEHPDLAC HGESCPLAQG
FYDRLPAARD AASRVPLLDR HAVREIARTH AVCPYYLTQE MIRWSDLVVA DYNYYFDRSA
MLYALTALNE WRVSVLVDEA HNLVERGRTM YTATLDHAAF RGVRLSAPGA LKSKMNKVYR
QWNTLAKRSK AEYETHDEEP AAFIEALTQL CTAIIDDMSE HPQRHDATLE RFYFDAMHFL
RLAEQMTEYG GKHSLFDITR TPRGCSGVDA ALCVRNLLPA PYLAPRFAGA HSTTLFSATL
QPADYYRNLL GMPASAVWVE VPSPFQPEQL DVHVARHIST RYSHRQRSLP AIVELIAGQY
ARRPGNYLAF FSSHDYLQQA AALLAECHPD IPIWSQARGM TEAGQAAFLD AFAPGGCGIG
FAVLGGVFSE GVDLPGDRLI GAFVATLGLP QVNPVNEQLR ERMDAAFGRG YDYAYLYPGL
RKVVQAAGRV IRTREDRGVV WLIDDRFGRP EVREMLPAWW EISPMDDRQR NVRERQPGS
|
|---|
| |