Gene Reut_B5806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B5806 
Symbol 
ID3613991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp2629388 
End bp2630557 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content56% 
IMG OID637695238 
ProductTRAP dicarboxylate transporter- DctP subunit 
Protein accessionYP_299993 
Protein GI73539626 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACGCT TCTTACTGCT TTGCAAGAAA TCAGGATGGC GCATCGTCGT GCATCACAAG 
GAGACAGGAA TGCCCAAGCA TTCATCCGTA GTGGGTCTGC TTACCTTATT GGTGTCATCA
AGGTATAGGC GGAGTCTTGC CAGACTCGCT TGTTACATCC CATTGTCCGT ACTGGCAACC
GCAGCGGTGG CGGACCCTCT CTCCGCCGCG ATGCCGGGGG TGAGAATCAT CCATATCGCC
GATTACCGTG GATATCTCTC GGTGGATCAC CCCGTGCGCC GTGGCATGAA CAAGTTTTCA
GAACTGGTGG CAGCCCGAAG TGGTGGCCGC ATACTCGTGC AGGCCTCCGC AGATTCCATG
CCGGAATCTC CATCAGTCCA GATCGCATCC TTGCAGGCAG GAGATGGCAG AACGCCAGAA
TTGATGCTTC AAGCTACGAT CGGGCTGGCT GATGTCGAGA AGGGCTTTGG TCTGATTGAT
CTTCCGTTCA CGATCAGCAA TGAAAATCAG GCCAATGCAT TGCTCGACGG ACCTTTCGGC
GCCACCCTGT TGGATCGTCT GGCAAGCCGT AATCTGATCG GACTCGCATG GTGGGAGAAC
GGCTTCCGGC ATGTGACGAC TTCTACTGGT CCCATCCTCC ATGCGGACAA CTTCATTGGC
TTGAAGATTC GTGTCATCCC TTCGCCTTTG TTCATGGAAA GCTTCAAGGA AATTGGGGCG
GATCCCGTCC CTTTGCCATT TTCTGAACTG CATGCCGCGT TGAAATCCAG GAGCGTCGCA
GCGCAGGACA ATTTCTATTC CCAGATAGTG ACGGGCAAAC TGTATGAGGT CCAGACCTAC
CTGAGTGTCA CCCACCACTC GTACGGTGCC ATGACATTGA TCGCGAGCAA GCGCTTCTGG
GACACGTTGG CGCCGGCTGA CCAGGCACTG TTGCGCGACG CCGCGGCGGA GGCCGGCCAG
TATCAGCGGC GCCTGATTCG CGCTGAGAAT GCCAGGATGC GTGCGGAGCT TGAAGCCAAA
GGCATGCGTA TCAATGAGAT GGAGCCCGCC GAACTCAGGA AGTTAGGCGA GCGAGCCCGA
CCGGTGCTTG CGCGCATTGC CCGCGACTAT GACGCTTCCG TTATTGACTT GTATAAGGCC
GAACTCGACA AGATTCGTAT GCTTCATTGA
 
Protein sequence
MSRFLLLCKK SGWRIVVHHK ETGMPKHSSV VGLLTLLVSS RYRRSLARLA CYIPLSVLAT 
AAVADPLSAA MPGVRIIHIA DYRGYLSVDH PVRRGMNKFS ELVAARSGGR ILVQASADSM
PESPSVQIAS LQAGDGRTPE LMLQATIGLA DVEKGFGLID LPFTISNENQ ANALLDGPFG
ATLLDRLASR NLIGLAWWEN GFRHVTTSTG PILHADNFIG LKIRVIPSPL FMESFKEIGA
DPVPLPFSEL HAALKSRSVA AQDNFYSQIV TGKLYEVQTY LSVTHHSYGA MTLIASKRFW
DTLAPADQAL LRDAAAEAGQ YQRRLIRAEN ARMRAELEAK GMRINEMEPA ELRKLGERAR
PVLARIARDY DASVIDLYKA ELDKIRMLH