| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5683 |
|---|
| Symbol | |
|---|
| ID | 3613340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 2514572 |
|---|
| End bp | 2516116 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637695116 |
|---|
| Product | methane/phenol/toluene hydroxylase:YHS |
|---|
| Protein accession | YP_299872 |
|---|
| Protein GI | 73539505 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCC GCGTTGCCAA GAAGAAGCTT GGCCTGAAGG AACGGTACGC CGCCATGACC
CGCGGCCTGG GCTGGGAGAC CACGTATCAG CCGATGGACA AGGTCTTTCC CTACGACACC
TACGAAGGCA TCAAGATCCA CGACTGGGAC AAGTGGCAGG ACCCGTTCCG CCTGACGATG
GACGCCTACT GGAAGTACCA GGGGGAGAAG GAAAAGAAGC TGTATGCGGT GATCGAAGCC
TTCGCGCAGA ACAACGGCCA GCTTGGCGTC AGCGACGCCC GGTACATCAA TGCACTGAAG
CTGTTCCTTC AGGGCGTGAC GCCGCTTGAA TACTGCGCTC ACCGTGGCTT TGCACATGTT
GGCCGTCAGT TCACCGGCGA GGGCGCGCGC GTGGCCGCGC AGATGCAGTC CATCGACGAG
CTGCGTCACT ACCAGACCGA GACGCACGCG ATCTCGCACT ACAACAAGTA CTTCAACGGG
CTGCACCGGG CGCACCATTG GTTCGATCGT GTCTGGTACC TGTCGGTGCC GAAGTCGTTC
TTCGAGGATG CGTGCACCGC CGGTCCGTTC GAGTTCCTGA CGGCCGTGAG CTTTTCGTTC
GAGTACGTGC TGACCAACCT GCTGTTCGTG CCCTTCATGT CCGGCGCGGC GCACAACGGC
GACATGAGCA CCGTCACCTT CGGTTTCTCG GCGCAGTCCG ACGAGTCGCG GCACATGACG
CTGGGTATCG AGTGCATCAA GTTCATGCTC GAGCAGGATT CCGGCAACGT GCCCATCGTG
CAGCGCTGGA TCGACAAGTG GTTCTGGCGC GGTTACCGCC TGCTGACCAT CGTGGCGATG
ATGCAGGACT ACATGCTGCC CAAGCGCGTG ATGAGCTGGA AGGAGGCATG GGAAATGTAC
GCCGAGGGCA GCGGTGGTGC GCTGTTCAAG GACCTCGCGC GCTACGGCAT TCGCGAACCA
CGCGGCTGGA AGGACGCCTG CGAGGGCAAG GACCATATCA GCCACCAGGC GTGGGCCACC
TTCTACAACT ACGGGGCCGC GGCGCCTTTC CATACGTGGC TGCCGCAGGA AGAGGAAATG
CAGTGGCTTT CGCAGAAGTA TCCCGAGAGC TTCGACAAGC TGTATCGCCC GCGCTTCGAG
TACTGGCGCG AGCGCGCGGA CGAAGGCCGC CGCTTCTACA ACAAGACGCT GCCGATGCTG
TGTACCACCT GCCAGGTCCC GATGTTCTTC ACGGAGCCCG GTGATGCCAC GAAGATCTGC
TACCGCGAGA CCAGCTACTT TGGCAACAAG TATCACTTCT GCTCCGACCA CTGCCAGCAC
ATCTTCGAGG ATGAGCCCGA GAAGTACGTG CAGAGCTGGC TGCCGGTGCA CCAAATCTAC
CAGGGGCACT GCTTCCCCGA AGGCACGGAC CCGACGGCGG AAGGCTTCGA TCCGCTGACA
GCCGTCCTGC AGTACTACGA AATGAACATC GGACGGGACA ACTTCGACTT CGAGGGATCG
GAGGACCAGA AGAACTTTGC CGCCTGGACA GGAGAGAAAG CATGA
|
|---|
| Protein sequence | MDTRVAKKKL GLKERYAAMT RGLGWETTYQ PMDKVFPYDT YEGIKIHDWD KWQDPFRLTM
DAYWKYQGEK EKKLYAVIEA FAQNNGQLGV SDARYINALK LFLQGVTPLE YCAHRGFAHV
GRQFTGEGAR VAAQMQSIDE LRHYQTETHA ISHYNKYFNG LHRAHHWFDR VWYLSVPKSF
FEDACTAGPF EFLTAVSFSF EYVLTNLLFV PFMSGAAHNG DMSTVTFGFS AQSDESRHMT
LGIECIKFML EQDSGNVPIV QRWIDKWFWR GYRLLTIVAM MQDYMLPKRV MSWKEAWEMY
AEGSGGALFK DLARYGIREP RGWKDACEGK DHISHQAWAT FYNYGAAAPF HTWLPQEEEM
QWLSQKYPES FDKLYRPRFE YWRERADEGR RFYNKTLPML CTTCQVPMFF TEPGDATKIC
YRETSYFGNK YHFCSDHCQH IFEDEPEKYV QSWLPVHQIY QGHCFPEGTD PTAEGFDPLT
AVLQYYEMNI GRDNFDFEGS EDQKNFAAWT GEKA
|
|---|
| |