Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_B5673 |
Symbol | |
ID | 3613330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007348 |
Strand | - |
Start bp | 2505787 |
End bp | 2507565 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637695106 |
Product | helix-turn-helix, Fis-type |
Protein accession | YP_299862 |
Protein GI | 73539495 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.450699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGAAGA GGCATCCCGG AAAACCCAAG TCCGGCTCAC CGGCGCAAGG CCATCCCGGC CGGAATCAGA AGCGCGAGTC CCCCGAGGCA ATCCGGGTGC CGGCGATCCA CGACCTCGCC AAGCGCCTGC GCTTCGCGCC GCAACAGGGT CGCATCTGGT TGGACGACCA ACGCATGATG CTAATGCACA TCAGCTCTCT TGGCGCCTTG CGGCAAGAAC TGATCGAAAG CCTTGGCAAG GAAACAGCGC GCGGACTGAT CACCCGTATC GGCTACCAGG CCGGCACGCG GGACGCAGCG ATGGCGCGCA AGGTCCGCGC CGGCCTGAAC ACCTATGACG ACTTCCTGGC CGGTCCACAA CTGGTCTCGC TGGAGGGTAT GGTGCATTGC GAACCGGTGG CGCTGGACAT CGATGTCCAG CGTGGCCACT ACTTCGGCGA TTTTTATCTG GTGGACAGCT CCGAGGCGGA AGCCCACATC GCCGGCTATG GTATCGGCAA TGAATCCGTG TGCTGGATGC TGATCGGTTA TGCATGCGGC TATACCAGTG CCTTCATGGG CCGTCCCATC CTGTGGAGGG AAACCGAATG CCGGGGGATG GGGCATGTGA AATGCCGCGT GGTAGGCAAG CCGGTGGAGG AATGGGAAGA CGCCCAGGAC GACCTGCGCT TCCTGAGGAT CGGCGATTTC GTCAAATGGG CACCGGTGGA CGAGGCGCCC CTGCCCGCCA CGAGCCGCAT CGCGGCGCGG CTGTCCAGCG CCCCGGAGAA CAGCTTCGGC GTGGTCGGCA TCTCCGCCGG CTTCAACACC GTCTGCCACA TGGTCAACAA GGTGGCGCCC ACCGACGCCA CCGTGCTGTT CCTGGGGGAA AGCGGTGTTG GCAAGGAAGT CTTTGCGAAC AACCTGCATC GCCTGAGCAA GCGCGCCGAC GGCCCTTACG TCGCGGTGAA CTGTGCGTCC ATTCCGGAAC ACCTGATGGA ATCCGAGTTA TTCGGCGTCG AGCGCGGCGG CTTTACGGGC GCCACCACAT CCCGCGCCGG CCGCTTCGAG CGGGCCGATG GTGGCACGCT GTTTCTCGAC GAGGTCGGCA CACTGAGCTT CACGGCACAG GGAAAGCTGC TGCGCGCGCT ACAGCAGGGT GAGATCGAGC GTGTGGGCGA TACACGCACC CGGAAAGTCA ACGTCAGGGT GGTTGCCGCC ACGAACGTGA ACCTGCGTGA AGCTGTCAAG GCTGGCCACT TCCGCGAGGA TCTGTTCTTC CGGCTGAACG TCTTTCCGAT CCAGGTGCCG CCGCTGCGAG AGCGCCGCGA CGACATCCCG CTGATGATGA ACTGGTTCCT CCAGCGCATG GCACGCAAGC ATGACAAGCA CATCACCGGC TTCCGCGAAC GCGCCGTGGA CGCGATGTTC GCCTATGACT GGCCCGGCAA CGTCCGAGAG CTGGAGAACA TGATCGAGCG CGCGGTCATT CTGGCCGAGG ACGGTGGCGC GCTCGACCTG TGCCACCTGT TCACCAGCGG CGAGGAAGTT GATACCACCG CTTTCATGCT GAAGCGCAGC GGCAGCATCG GACGCGTCAG CGAAGCCAGC GAAGCGGAAT CGCCGCCGAG CGCTGCCGAA GGGCGACCTG GTCTGGCCGA AACGGAGGTG GCCATGCTGC GTGCAGCCGT TGCCGAAGCC AACGGCAATC TGTCGCGCGC AGCCCGGGTG TTGGGAATCA GCCGTCCGAC GCTGGCGTAC AGGCTGCAGA AATACGGCAT TACGCCTGAA GCGCAATGA
|
Protein sequence | MAKRHPGKPK SGSPAQGHPG RNQKRESPEA IRVPAIHDLA KRLRFAPQQG RIWLDDQRMM LMHISSLGAL RQELIESLGK ETARGLITRI GYQAGTRDAA MARKVRAGLN TYDDFLAGPQ LVSLEGMVHC EPVALDIDVQ RGHYFGDFYL VDSSEAEAHI AGYGIGNESV CWMLIGYACG YTSAFMGRPI LWRETECRGM GHVKCRVVGK PVEEWEDAQD DLRFLRIGDF VKWAPVDEAP LPATSRIAAR LSSAPENSFG VVGISAGFNT VCHMVNKVAP TDATVLFLGE SGVGKEVFAN NLHRLSKRAD GPYVAVNCAS IPEHLMESEL FGVERGGFTG ATTSRAGRFE RADGGTLFLD EVGTLSFTAQ GKLLRALQQG EIERVGDTRT RKVNVRVVAA TNVNLREAVK AGHFREDLFF RLNVFPIQVP PLRERRDDIP LMMNWFLQRM ARKHDKHITG FRERAVDAMF AYDWPGNVRE LENMIERAVI LAEDGGALDL CHLFTSGEEV DTTAFMLKRS GSIGRVSEAS EAESPPSAAE GRPGLAETEV AMLRAAVAEA NGNLSRAARV LGISRPTLAY RLQKYGITPE AQ
|
| |