| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5644 |
|---|
| Symbol | |
|---|
| ID | 3613244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 2468828 |
|---|
| End bp | 2470465 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637695077 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_299833 |
|---|
| Protein GI | 73539466 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4147] Predicted symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.439456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCC TATTGATCAC CGCTGCCGCG CTGGCAGCAA CCACCCCGGC CTTCGCGGCG
ACGCCTCCGG TCGGCCAGGG CCTCAACCTG ATTGCCATCG GCATGTTCGT GGTATTTGTC
GCGGCGACGC TCGGCGTGAC GCGCTGGGCA GCACGGCGCA ACCACAGCGT TGCCGACCAC
TACGCGGCGG GCGGCAAGAT CACTGCGATG CAAAATGGCT GGGCCATCGC CGGCGACTAT
ATGTCGGCAG CATCGCTGCT CGGTATCTCG GCGCTGGTCT TCACCAGCGG CTACGACGGG
CTGATCTACT CGATTGGCTT TCTGGCCAGC TGGCCGATCA TCCTGTTCCT GATCGCCGAG
CCGCTGCGCA ACCTCGGGCG CTACACGCTG GCCGATGTCC TGTCCTATCG CCTCAGGCAG
CGGCCAATTC GTGGTTTCTC GGCATCGAGT TCGATCGTCA TCGTGCTCCT GTACCTGGTC
TCGCAGATGG TCGGCGCCGG CAAGCTCGTG GAATTGCTGT TCGGCTTCAA CTACACCTCG
GCGGTCGTGC TGGTCGGCGT GCTCATGGTC GTCTATGTGT TCTTTGGCGG CATGCTCGCG
ACCACCTGGA TCCAGATCAT CAAGGCGGTC ATGCTGCTGG CCGGTTGCGC ATTCATGGCT
TACATGGTGC TCAGCCGTTT CGGCTTCAGC CTGAACAGCC TGTTCGACCA CGCCATTGCC
GCGCACGGCA AGCACGAGGC GATCATGCGT CCCGGCGGTC TGGTGTCCGA TCCGGTCTCC
GCCGTTTCAC TGGGGCTGGC GCTGATCTTC GGTACGGCTG GACTGCCGCA CATCCTGATG
CGCTTTTTCA CCGTCGGCGA TGTCAAGGCC GCACGCAAGA GCGTGCTTTA TGCGACCGGC
ATCGTCGGCA CGGGCTATGC CATGATCATC GTGATCGGAT TTGGCACGAT CGCGCTGGTT
GCGCAGGATC CGCTGTACCA CAATGGCGCG GGCGCAGTGA TTGGCGGCGT GAACATGGTG
GCCGTGCATC TGGCTCACGC AGTCGGCGGC AATGTGTTCC TCGGCTTTAT CTGCGCCGTG
GCGTTCTCGA CCATCCTGGC TGTCGTGGCA GGCCTGACGC TCGCCGGATC TTCGGCGATC
TCGCATGACC TCTATGCAAC GGTCATCCGC AAGGGGCAAG CGTCCGACAA GGATGAGCTG
CGAGTGTCCC GCATGACCAC GCTGGTGCTT GGTGTCCTGT CGATCCTGCT CGGCATTCTG
TTCGAGAAGC AGACCATTGC GTTCATCGTC AGCCTGACCT TCTCCATCGC GGCCAGCTCC
AATTTCCCCG TGCTGCTTCT GTCGATCTAC TGGCGCGGGC TCACCACGCG CGGCGCCGTA
GTCGGCGGCA TGCTGGGCCT CGTGACGGCG GTCGTCCTGA CGATCCTCAG CCCAACGGTC
TGGGTACAGG TGCTGGGACA TGCGTCCGCA ATCTACCCGT ACGAATATCC GGCGCTGTTT
TCGATGCTGG TGGCATTCCT CGGCATCTAC GTGTTCTCCG TGACCGACCG ATCGCCTCGC
GGCGCGTGGG AACGCGATGC CTACCAGAAC CAGCGCGTAG ATGGCGAACT GGGGCTCGGC
AGTAAAACCG CCGGCTGA
|
|---|
| Protein sequence | MKRLLITAAA LAATTPAFAA TPPVGQGLNL IAIGMFVVFV AATLGVTRWA ARRNHSVADH
YAAGGKITAM QNGWAIAGDY MSAASLLGIS ALVFTSGYDG LIYSIGFLAS WPIILFLIAE
PLRNLGRYTL ADVLSYRLRQ RPIRGFSASS SIVIVLLYLV SQMVGAGKLV ELLFGFNYTS
AVVLVGVLMV VYVFFGGMLA TTWIQIIKAV MLLAGCAFMA YMVLSRFGFS LNSLFDHAIA
AHGKHEAIMR PGGLVSDPVS AVSLGLALIF GTAGLPHILM RFFTVGDVKA ARKSVLYATG
IVGTGYAMII VIGFGTIALV AQDPLYHNGA GAVIGGVNMV AVHLAHAVGG NVFLGFICAV
AFSTILAVVA GLTLAGSSAI SHDLYATVIR KGQASDKDEL RVSRMTTLVL GVLSILLGIL
FEKQTIAFIV SLTFSIAASS NFPVLLLSIY WRGLTTRGAV VGGMLGLVTA VVLTILSPTV
WVQVLGHASA IYPYEYPALF SMLVAFLGIY VFSVTDRSPR GAWERDAYQN QRVDGELGLG
SKTAG
|
|---|
| |