Gene Reut_B5598 details

Gene Information

• Locus tag: Reut_B5598
• ID: 3613052
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia eutropha JMP134
• Kingdom: Bacteria
• Replicon accession: NC_007348
• Strand: +
• Start bp: 2416153
• End bp: 2418135
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637695031
• Product: diguanylate cyclase/phosphodiesterase
• Protein accession: YP_299787
• Protein GI: 73539420
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain; [COG2200] FOG: EAL domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGCCT TGAGTACCGC CCTTTTGCTG CTGGCCGCCC TGCTCGGCGT GGCCGCCGTT 
CTCGGCGGTC GCCAGGCACG GCCGGAGGTG GGGGCTCGCC GTCCATTGCG CGCGTTGACG 
TGGTCCGCCG CGCTGCTGTC GCAACTGACG GTCGGATTGC CGTTCGTGGT GGTGATCAGC 
TCCGGCGCGG TGCCTGCGGC CAATGAAACC GCACAGATCG CTGCGGCCTT TGCCGTTGCC 
GCGGCGGCCA CCTCGGCGGG CAAGTTGCTG TTTGCGTGGC TCAGGCAGGG CGCGCGGCTT 
TGGCGCGGCG CGGCGATTGC CTCGGCACTG GCCGGCGCCG GGCTGGTGGC GGTCGCGGGT 
ACCCGGCTTG GCCGGGTCTG TGGCGCAGGC TCCATGACCG CACGCGCGTG CATCGACGCG 
GCGGGATTGC CGCATCCGGC TTGGCTGGCG GGTGGGCTGA CCGCGCTGTG CCTGCTGATG 
TTGCTCGTCC ACAAGGCGCA GTCCCGCGGC TGGGTGCCTG CTCCCAGGCG CAATGCGGCT 
GGCGCTACCG ACGAACTGTC TGACGAAGCG GCCGGCGCCT TGCGCGTGGT GGAGTCGCGG 
CAGATCCGGC GTAGCGGACG GATTCCCGGG CGTCTGGTCG TGCGGCCTGG CGCGCGGGGC 
CAGGGCACAG TGGCCGAGTA CAGCGTGGCT ACCGCTATGC CGGACCGCGT CGCATTCGGG 
CGCTGGCTCG ACCAGGCGAT CGCCCAGGCG CGGCTGGCCG AAAGCAGCTG CGCCGTCCTG 
CTCATCCATG TCGCGGATTT CCGCGAAGTC GACGAAGTCT TTGAAGTGCG CGCGGACGAC 
ATCCTCGCGC AGGATGCCGG CGCGCTGGCG CAGGCCGCGC TGGAACCCCA CGATTTCCTG 
GCCCGGCTCG CGCGCGACGA ATTTGCGGTC GGGGTGCCCG AAATGGTCCA CCATGGCCGT 
GCGCAGGAAC TGGGCTCGCG CGTGCTAGGC TCGCTGGCCG AGTTCGTGGC GTCGCGCGGC 
CTGCAGATGC AGATCGGCGT GAACATCGGC ATTGCCATCT ATCCGCGCGA TGCACAGACG 
TCCGAGTCGC TGATGCAGGC CGCCCGCGTG AGCCTGACCG AGGCGCGCGA AAGCGGCTCC 
AACCAGGTGC GCCTGTTCAA CAGTGCGGCC GGCGAGCGCG CGCGCCGCAC GCGCGTGATC 
CGGCGCGACC TGTGGACGGC GATTCAGGAC GATGCGCTGT CGCTGCAGTT CCAGCCGAAG 
TTCGACGCGC GGCGGCGCAC CGTGGTCGGC GCCGAGGCGC TTTGCCGCTG GCGCCACCCG 
GCGCTTGGCC AGGTCAGCCC GGCCGAGTTC ATTGCCGTGG CCGAGCAGTC CAGCCAGATC 
GATAAGCTTG ACGACTGGGT CATTGCCAGC GTATGCCGGC ACGTGCGCCA GTGGCAGGAC 
GCCGGTTTGC CGCTAGTGCC GGTGGCCATC AACGTATCGG GCCTGCGCTT CGCCAGCCGC 
AATTTCCCGC AATACCTGCT CGAGCAGATC CACCAGCACG ACATTCCGCC GTCGGCCATC 
ACGCTCGAAA TCACCGAGAC GGCGGCCATG AAGGACATCG CCAAGTCGCT CGAAACGCTG 
GCCGAACTGC AATCGCTCGG CATCCAGGTG GCGCTGGACG ACTTCGGCAG CGGCTATTCG 
AGCCTCGGCT ACCTGAAGCG ACTGCGCGTC GGCACGCTGA AGATTGACCG GACGCTCATC 
GGTGGCCTCG ATGCCGATGC GCAGGGCCGG GCCATTGTCG GCTCCATGGT GGCGCTCGCG 
CACGAGCTGC GCATGAAGGT GGTGGCCGAA GGCGTGGAAT CGACGTCGCA ACTCGAGATC 
CTGAACGAGA TGGGCTGCGA CGAGGTGCAG GGCTACCTGC TGTCGCTGCC GCTGGACGCC 
GCGGGATTTG CCGAGGCGCT CGAGCAGAAG GCCGCCGCCC GCGAAGTCCA GGCGGTGCGC 
TGA 

 

Protein sequence

MIALSTALLL LAALLGVAAV LGGRQARPEV GARRPLRALT WSAALLSQLT VGLPFVVVIS 
SGAVPAANET AQIAAAFAVA AAATSAGKLL FAWLRQGARL WRGAAIASAL AGAGLVAVAG 
TRLGRVCGAG SMTARACIDA AGLPHPAWLA GGLTALCLLM LLVHKAQSRG WVPAPRRNAA 
GATDELSDEA AGALRVVESR QIRRSGRIPG RLVVRPGARG QGTVAEYSVA TAMPDRVAFG 
RWLDQAIAQA RLAESSCAVL LIHVADFREV DEVFEVRADD ILAQDAGALA QAALEPHDFL 
ARLARDEFAV GVPEMVHHGR AQELGSRVLG SLAEFVASRG LQMQIGVNIG IAIYPRDAQT 
SESLMQAARV SLTEARESGS NQVRLFNSAA GERARRTRVI RRDLWTAIQD DALSLQFQPK 
FDARRRTVVG AEALCRWRHP ALGQVSPAEF IAVAEQSSQI DKLDDWVIAS VCRHVRQWQD 
AGLPLVPVAI NVSGLRFASR NFPQYLLEQI HQHDIPPSAI TLEITETAAM KDIAKSLETL 
AELQSLGIQV ALDDFGSGYS SLGYLKRLRV GTLKIDRTLI GGLDADAQGR AIVGSMVALA 
HELRMKVVAE GVESTSQLEI LNEMGCDEVQ GYLLSLPLDA AGFAEALEQK AAAREVQAVR