| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5522 |
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| Symbol | |
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| ID | 3614392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007348 |
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| Strand | + |
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| Start bp | 2319490 |
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| End bp | 2322720 |
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| Gene Length | 3231 bp |
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| Protein Length | 1076 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637694947 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) |
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| Protein accession | YP_299711 |
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| Protein GI | 73539344 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGC GTTTGCCGAC GTCCGCCGTG CCCGCCTTGC TCGCGCTGCT CGTTGCCGCG
GGCGGTACGC TATTGACGGT TGCTGCATGG CGGCAGGTGG CGCAACCCGA GCAGCGCCTG
GCGGAGCAGC GCTTCGACGC GCTGCTGACC GACGCCACAG TCGCGCTGCG CGCGCGGCTG
CAGGAGAACG ACCAGCTCCT GCGCGGCGTG GCGGGCCTCA TGACGGCCAA TCCGGCGACA
TCGCGAACCC AGTGGCGCAA CTACCTGTAT GCGGCCCAAC TCGACGAACT GCCGCCCGGC
ACGCAGTCCG TCGGCTATGC CCCCGTGGTG CGGCGCGACG GGGTTGCCCG CCTGGCTGTC
GCCGCGCGCC GCGACGGCCT GTCCGACTAC GCGATCCATC CCACGGGCGC GCGCGATCTC
TATGCCCCGG TCTTCTATAT CGAGCCGTTG GCTGGGCGCA ACGCCCGTGT GCTGGGCTTC
GACATGCTGT CCGACCCGGC GCGCCGCGCC GCCCTGGAGG CCGCGCGCGA CAGCGGCGAG
CCGCGTGCCA CGAGCGCGCT GGAACTGCTG CGTGAAGCCG AGTCATCGAC GCACCAGCTT
GGCGCGCTGG TGTTCGTGCC CATTTACGGC AGCGGTGAGG CGCTGAGCAG CGTCGAGCAG
CGGCGCGAGG CGGTTGTCGG CTACGTCTAT GCGTCGCTGC GCCTGGGCGA CCTGATGCGC
AGCGTGGCGG GACGCGGCGC CGGCGAGCTG GTGCTGTCGC TTCACGAGGG CTCCGGCAGC
GTACGCGGCA GCAAGGTGTC GGGCGACCTC ACCGATGGCG AGCGGCGCGA CGACGGCGCT
ACGCCGATGC TGGCCGGCGA GCGCCATTTC GACTATGGCG GACGCGGTTG GACCCTGCAT
GCGTCGACCC GGCCGGCGTT CGAAGCGGCC CACGGCGGCG ATCGCGCCCG CATGGCCGCC
GCCGCCGGGG CGCTGGCCAC GTTCCTGATG GTGCTGCTGA CCTTTGCGCT CGCACGCCGG
GGCCAGGCGG CGCGGCGGGA CGCGGCGGCG GCCGACAGCC GGCGGGACGC CGACCATGCG
ATGCTGCAGG CTTGCATGGC GCTGGCCCCT GACGGCTTTC TCGTGACCGA TGCCGACGGC
AAGGTGCTCA GCGCGAGCCC GCGCGCAATG CAGCTCTTCG GCGCCGGCAT CGACGGCCTG
CAGGGCAGGG CTCTGGCCGA CCTGGTTCCA GGCGTGGCCG GCATCGCCAT GGCGTCCGTC
GCGCCGTCTG CCCAGGCATC GGCACAGCGC GAACTCCAGG GCGTGCGTGT GGACGGCAGC
CGTTTCCCGT TGCGGGCCGG CATGGCGCGC CTGCCCGGCG CCAACGCCGG CGAGCCTGCC
CGCTCGCTCT GGATCCTGAC CGACCTCGAC GAACTGTGGC ACGCGCGCCA GCAGGCCGCC
GTACAGGCCG GGCGCTATGC GAGCCTGGCC GACCACGCGC CGATGTGCGT GATCACCTTC
GATGAAGACG GCCGCATCAC CGATATCAAT CGCACCGGCC AGCACATGCT CTGGTATCCC
GGCCCGGCGC AGGGCGCAGG CATACGCTAT GCCGATTTGC ACGTGGCCGA CGAACTGGCC
GAGCGTGCGC GCGACCTGAC GCGCGAGCTT GGCGAGACCA TCGCGCCGGG GCTGCCCGCG
CTGGTGGCCA AGGCCCGCCT CGGGCTGGTC GACGAACGTG AATGGACGTG GGTGCGCAAG
GGGGGCTCGC GCGTGCCGGT GCAAGTCACG CTGCGCGAAC TGCCTGCCGA AGACGGCCAG
CCGCGCCAGT ACCAGGCCAT TGCGTGCGAC CTGACCGAGC GCCACCGCGT GGATGAATAC
ATCCGCCACC TGGCGCTGCA CGATGCGCTG ACCGGCCTGC CCAATCGCGC CGAGCTGACC
GAGCGCTGCG AAGCCGTGCT GCTGCACGCG CGGCGCCACG GCGAGCGCGT GGCCCTGCTG
CTGCTCGACC TTGATCATTT CAAGCACATC AACGATTCGC TCGGCCACCC GGTTGGCGAT
GACGTGCTGC GCACCATTGC CGACCGGCTC AAGGCCGCGG TGCGCCAGGG CGACCTGGTC
GCGCGCATGG GCGGCGACGA GTTCGCGGTC GTGCTGGGCG GCCTGCGCCA TGACACCGAG
GCGGAGCTGG CGGCCTCAAA AATTCTCGCG CGGGTGTCCG AAGCGCTGGA GATCGGCGGG
CAGCGCCTGC GCGTGACGCC ATCGCTGGGC ATTGCGATGT TCCCGGCCGA CGGCGAATCG
CTGACCGACC TGCTCAAGTC GGCCGATGCC GCGCTGTATG CCGCCAAGCA GGGCGGCCGC
GCGCAGCTGC GCCGCTTTGC CAGCGAGATG GCCGAAGCCT CGCTCGCGCG CCTGACGATT
GAAGGGCTGC TGCGCCGCGC GGTCGACGAA CAGGAATTCA CGCTGCGCTA CCAGCCCATC
GTCGATACGA GCACGCTGGC CGTGACCGGC GTCGAGGCGC TCATGGCCTG GCATACGCCT
GAACGCGGCA TGATGCAGCC GTCCGAGTTC ATTCCCATTG CCGAGCAATG CGGCCTGATC
GGCGCGCTCG GCGAATGGGC GCTGGCCACG GCCTGCAGCG ACATCCAGGC CTTGCGCACG
GCGCTCGGCC GCGACATCGA GGTGGCCGTG AACATTTCCC CGCTGCAGCT GCGCCAGCCG
GGATTCCCCG ACCTCGTTGC ACGCACCTTG CAGCAGGCAG GCCTGCCGCC GGGCAGCCTG
ACCATCGAAG TGACGGAAGG CATCCTTGTC GAAGGGGGCG AGACCACGAT CGACACCTTC
CTGCGGCTGC GCGAATTGGG CGTGCAGCTG TCGATCGACG ACTTCGGCAC AGGCTATTCG
GGCCTGCACT ATCTCACGCG CCTGCCGATC AGCCGGTTGA AGATCGACAA GTCCTTCGTT
GATGACGTGG CCAGGCCCGG ACACGACCAG GTGGTCGCGG CGGCGATCAT CGCGCTGGGC
CACCAGCTCC ACCTCAAGGT CGTGGCCGAA GGCGTGGAAA CCATGGCGCA GTTCGAGTTC
CTGCGCGCCC AGGGCTGCGA TGCGCTGCAG GGCTACCTGT TCTGCCGCGC GGTCGGCCCC
GACACGCTGC GCGAGGTGCT CGACAGCGGC TTCGAGCGCA TGCTGCCCGC CGACGCCTGG
TCCGAGACCG GTGCGAGCGC CGAAACCGGT ACTGACCGCG ACCCCGCCTG A
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| Protein sequence | MKLRLPTSAV PALLALLVAA GGTLLTVAAW RQVAQPEQRL AEQRFDALLT DATVALRARL
QENDQLLRGV AGLMTANPAT SRTQWRNYLY AAQLDELPPG TQSVGYAPVV RRDGVARLAV
AARRDGLSDY AIHPTGARDL YAPVFYIEPL AGRNARVLGF DMLSDPARRA ALEAARDSGE
PRATSALELL REAESSTHQL GALVFVPIYG SGEALSSVEQ RREAVVGYVY ASLRLGDLMR
SVAGRGAGEL VLSLHEGSGS VRGSKVSGDL TDGERRDDGA TPMLAGERHF DYGGRGWTLH
ASTRPAFEAA HGGDRARMAA AAGALATFLM VLLTFALARR GQAARRDAAA ADSRRDADHA
MLQACMALAP DGFLVTDADG KVLSASPRAM QLFGAGIDGL QGRALADLVP GVAGIAMASV
APSAQASAQR ELQGVRVDGS RFPLRAGMAR LPGANAGEPA RSLWILTDLD ELWHARQQAA
VQAGRYASLA DHAPMCVITF DEDGRITDIN RTGQHMLWYP GPAQGAGIRY ADLHVADELA
ERARDLTREL GETIAPGLPA LVAKARLGLV DEREWTWVRK GGSRVPVQVT LRELPAEDGQ
PRQYQAIACD LTERHRVDEY IRHLALHDAL TGLPNRAELT ERCEAVLLHA RRHGERVALL
LLDLDHFKHI NDSLGHPVGD DVLRTIADRL KAAVRQGDLV ARMGGDEFAV VLGGLRHDTE
AELAASKILA RVSEALEIGG QRLRVTPSLG IAMFPADGES LTDLLKSADA ALYAAKQGGR
AQLRRFASEM AEASLARLTI EGLLRRAVDE QEFTLRYQPI VDTSTLAVTG VEALMAWHTP
ERGMMQPSEF IPIAEQCGLI GALGEWALAT ACSDIQALRT ALGRDIEVAV NISPLQLRQP
GFPDLVARTL QQAGLPPGSL TIEVTEGILV EGGETTIDTF LRLRELGVQL SIDDFGTGYS
GLHYLTRLPI SRLKIDKSFV DDVARPGHDQ VVAAAIIALG HQLHLKVVAE GVETMAQFEF
LRAQGCDALQ GYLFCRAVGP DTLREVLDSG FERMLPADAW SETGASAETG TDRDPA
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