Gene Reut_B5521 details

Gene Information

• Locus tag: Reut_B5521
• ID: 3614391
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia eutropha JMP134
• Kingdom: Bacteria
• Replicon accession: NC_007348
• Strand: -
• Start bp: 2317203
• End bp: 2319194
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637694946
• Product: PAS:GGDEF
• Protein accession: YP_299710
• Protein GI: 73539343
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain
• TIGRFAM ID: [TIGR00229] PAS domain S-box; [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGTCT TCTTGCCTTC GCTGAAAGCG CGTATCGCGT TGATCACCAC GGTCCTGGCC 
GCGGTGTTCG GCACCGGCAT CGTGCTGACG TCGCTGTTCG CCGCGCACCG CGACCTGCAA 
GACGTGCTGC AGGACGAGCA GGACTCCATC GTCAAGCTGT CCGCGGACCA GCTCGACACC 
GCCATGGAAG ACCGCATCAT GCTGCTGAGG CAGCAGGCCG CGCAGCTTGG CGGCCTGTTT 
GGCACGGCGC GCGGCGCGCA GGCCCCCGCG GCAATGGCGC AGGCGCTGGC GCAGGTACGA 
CGCGCCATTC CGGTCCCCGG TGCGTTCAAT TCACTGATGG TCGTTGACGC GCGCGGCACG 
GCGCTCGGCG ACAGCGGGAT GGTCACCGAG GTGGGCGACC GCACCTATTT CCGCGAAGCC 
GCACGCACGC TCGCCCCCGT GATCAGCCCG CCGATCCGCG CGCGCACCAA CGACCGCCTC 
GGCGTGATCG TCGCCGTGCC GGTCCTGTCC GCGCAGGGAC GCTTTGCCGG CCTGGTCGGC 
GGCTGGCTCG ACCTGGCTCG TTCGAACTTC CTGGTCGAGG TGCTGCACAA CCGGTTGGGC 
ACCACGGGCT TCTACTGCCT GGTCTCCGCG GGCAGCCGCC CCGTCTACAT ACAGCATCCC 
GACCCGACCC AGGCGCGCCA GCCAGCCCGC GCGATCGGCG ACACCTGTGG CCAGGACGAT 
CGCGCCGCCA CGTTGGAATT CCTGACACCC ACGCGCCCCG TAGTCTCGCG CTACCTGATG 
TCCACGACGG GCTGGGAACT GGTGGCGCTG CTGCCCGCGC ACGAGGCCTA CGCGCCGCTG 
CACCGCATGC AGCAACGCTT CCTGATCCTG GCGGGGCTAG CGCTGCTGCT GGTGGCCGCG 
TCCATCTGGC TGGCCGTGCG CCTTCTGCTG GCGCCGCTGA CGCGGCTGCA TGAAGTGGTC 
AGGGACAGCG CGTCCGACCT GTCCGCGTTC GAGCGGCTGC CCGAGCGGCA GCACCGCGAC 
GAGATCGGCG ACCTTGCGCG CGCCTTCACC CGCCTGATGC GCGACGTGCG CGAACGCCGC 
CAGGAACTGG ACCGCAGCGA GCGGCGCCTG CGCGCGGTGA CCGACACGCT GCCGTCGCTG 
CTGGCCTTCA TCGACACGGA CGAGCGCTAT GTGTTCAACA ACATTGCGTA CGAGCACACC 
TTCGGCCTGA CGCTGGAGGA ATTGCGCGGC AAGACCGTGC GCGAGGTATT GGGCGAAACG 
CGCTATGCCA GGGCCCAGCC TTTCCTGCAG CGCGCACTGG CCGGCGCCGT GGTGACCTTC 
GAGTCCGAGG AAAACGAACC CGAGTACCAC TGCATGGAAA CCAGCTACCG GCCCGAATGG 
AGCGCGGATG GCAGCGAGGT GGTCGGCGTG CATATCCACG TGCAGGACAT TACGCCACGC 
AAGCTCGAAA CCATGCGGCT ATCGCATATT TCCAGCACGG ACCACCTGAC GCAGCTACTG 
AACCGCAGCG CGTTCGAAAG CCGCCTGCAG GATGCCATGG CGCGATGCCG CGAAAGCGGC 
GGCATGATGG CGCTGCTGTA CCTGGACATG GACCGCTTCA AGGCGGTCAA CGACATCCAT 
GGCCATGCGG CCGGCGACCT GCTGCTGCAA GCCTTCGCCA AGCGCGTGCT AGGCTGCGTG 
CGCAAGCAGG ATGCGGTGGC GCGGCTCGGC GGCGACGAAT TCGCGGTGAT CCTCGAGAGC 
GTTGGCCATG CGGCCGCGGC GCGCAGCGTG GCTACCGACA TCCTGTGCGC GGTGGGCCAG 
CGCTTTCACT TCGAAGGCAT GTTCGCCGAT ATCGACGTGA GCATCGGCGT GGCGCTGTAC 
GATGGCGGCC CGATGCAGGA GCGCGAACTG ATGCGCCTGG CCGATGTGCT GCTCTACCGC 
GCCAAGGGCG CGGGACGGGG CCGCTACGAG ATCGGCCCCC CGGAACTGAT TACCGCAGAC 
AGCGCTCAGT GA 

 

Protein sequence

MPVFLPSLKA RIALITTVLA AVFGTGIVLT SLFAAHRDLQ DVLQDEQDSI VKLSADQLDT 
AMEDRIMLLR QQAAQLGGLF GTARGAQAPA AMAQALAQVR RAIPVPGAFN SLMVVDARGT 
ALGDSGMVTE VGDRTYFREA ARTLAPVISP PIRARTNDRL GVIVAVPVLS AQGRFAGLVG 
GWLDLARSNF LVEVLHNRLG TTGFYCLVSA GSRPVYIQHP DPTQARQPAR AIGDTCGQDD 
RAATLEFLTP TRPVVSRYLM STTGWELVAL LPAHEAYAPL HRMQQRFLIL AGLALLLVAA 
SIWLAVRLLL APLTRLHEVV RDSASDLSAF ERLPERQHRD EIGDLARAFT RLMRDVRERR 
QELDRSERRL RAVTDTLPSL LAFIDTDERY VFNNIAYEHT FGLTLEELRG KTVREVLGET 
RYARAQPFLQ RALAGAVVTF ESEENEPEYH CMETSYRPEW SADGSEVVGV HIHVQDITPR 
KLETMRLSHI SSTDHLTQLL NRSAFESRLQ DAMARCRESG GMMALLYLDM DRFKAVNDIH 
GHAAGDLLLQ AFAKRVLGCV RKQDAVARLG GDEFAVILES VGHAAAARSV ATDILCAVGQ 
RFHFEGMFAD IDVSIGVALY DGGPMQEREL MRLADVLLYR AKGAGRGRYE IGPPELITAD 
SAQ