| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5422 |
|---|
| Symbol | |
|---|
| ID | 3612977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 2210294 |
|---|
| End bp | 2212606 |
|---|
| Gene Length | 2313 bp |
|---|
| Protein Length | 770 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637694847 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_299611 |
|---|
| Protein GI | 73539244 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGAC GCCGTTGCCG CACCCGTCCG CTGCGGGTGG TGCCGTGCCT GAGCGCGCTG
GCACTGTCCG CGCCCGGGTC CGCGGCGGCG CAGCAGGCTA CCGGCGAAGC GGCCGCTGAC
CAGGTCCGCA ACCTGCAGGA GGTCACAGTC GTCGCACCCA CCCCGTTACC GGGCTTCACC
ATCGAGCGAC AGGCCTTTGC CGGCAATGCG CAAACCGCCA CCGACGGCGA CCTCGAGCGC
GTGAAGGCGC CCAACCTGAC AAGCTTTCTG GCGGAGACCA TGACTGGCGT AGTGGTCAAC
GACGCGCAGG GCAACCCGTT CGCGCAGGAC CTGCTCTATC GCGGCTACCG GCTGTCGCCC
ACGCTGGGGT CGGCGCAGGG CCTTTCGCTA TACCTGGACG GCGTACGCCA GAACGCCGCG
CTGGGCGACG TGATCCAGTG GGCAGCCATC CCCGAAGCTG CGCTCAGCAC CATCACGCTG
GTGCCAGGCA GCAACCCGCT CTACGGGCTC AATACGCTGG GCGGCGCGCT CGCGCTCCAG
ACCAAGTCCG GCGAAACCCA TCCGGGTGTG GAAGCCGACC TGAGCATCGG CAGCTACGGG
CGCGCGCGCC TGGACGTCAG CGCCGGCAAG GCGCTGGGCG ACGGCTGGCA CGCCTACATG
GCAGGCACGG GATGGCGCGA GGACGGCTGG CGCGACCGCT CGGACAGCGA CCTGGGCAAC
CTGTTCTTCA AGCTGGGCCG CTCGACCAGC GGTACGCAAT GGAACGTGAG CGTACTGGGC
AGCAGCAGCC GGCTGTCCGG CAATGGCCTG ACACCGGACA GCCTCTACGC CGCCGATCGC
CGCGCGATCT ACACCGCGCC CGACGAGACG CGGTCGCGCT CGCTGCAGGT CGTGCTCAAC
GGTGCGCACC AGTTCAACGC GCAGGACCAG CTTCAGCTCA CGCTGTACCT GCGGCAGACC
CGCACGCACG CCAACAGCGG CGACATCAGC GATGCCTACC TCGACACCGT GCTCGATTGC
CAGGGCCAGG CCGGGAGCGG CGATTGCGAG GCCGACGATG CGCCGCCCAA CGCCGTGCTC
AACAGCGCCA CGGTGCGGGA AACGGGCTAT GGGGCCTCGG CGCAGTGGTC GCATGATGGC
GATACCCACC GTTTTGCGTT CGGTGCGGCG CTCGACCTGA ACCGCTCGCA CTATACGCAG
ACCACGCAGC AGGCCAGCTT CGACAGCGCC CGCAATGCCG TGGCCGATGC CGGCGCGCCG
GTAGTGACCC AAGCCGCGCT GGACGGCCGC GACAGCACGG TCGGGCTGTT TGCCACCGAC
ACCATGCGCC TGCTGGAAGG CACCTTCCTG ACGCTGGCGG CGCGGTGGAA CCAGGGCCGT
CGCCACACGC TGCTCAATCT CCCTACGCAG TCCGACGAGA GCTTCACCTA CTCGAAGCTA
AACCCTTCCG TTGGCCTCAC GCACCGGTTG CTGGACCGGC TGGTGGTGTT CGGCTCGGCG
TCGCAGGGCA CGCGCATGCC GACGGCCATC GAGCTCGGCT GTGCCGATCC CGCCAACGCG
TGCCAGCTTC CCACCGGATT GCAAGCGGAC CCATTTCTGC GCCAGGTCGT CACCCGCACG
CTGGAATTTG GCGGACGCTG GCAGCCCGCC GATGCCACCG AGGTCACGCT GGCGCTGTAC
CGCAGCGACA ACCGCGACGA CATCGTGTTC CAGCGCTCTC CGGTCAGCCC GCTCGGGTAC
TTCTCCAACT TCCCCAAGAC CCGCAACGAA GGCGTGGAAC TGGGGCTGCG CCAACGTCTT
GGCCGCCTGA CACTGCGCGC GGGCTACAGC TACACGCGCG CGACTTACCA GGCGCAGGGC
GAGCTGCAGA CGCCGTTTGC GGCGCCCGTG GCGGTACAGC CCGGCACGCG CATGGCCGGG
ATCCCGCTGC ACAGCTTCAG GCTCGGCGCC GACTGGCGCG CCACAGCGGC GCTCAGTGTC
GGCGGCGACC TGCTGGTGTC GTCGTCGCGC CCGGTCGCCG GCAACGAGGA CGGCGCGCTG
AGCGCGCAGA ACCCGGCGCT GTCCGATACC GGCGGCTACC TGCTGCTGAA CCTGCGCGCG
AGCTGGCAGT TCTCGCCGCG CTGGCAGGTC TATGGCCGCA TCGACAATGT GTTCGACCGG
CGCTACGCCA CCTATGGCCA GGCCGGCTAT AACCTGTTCG CAGGCGGATC GCTGCTGCAG
CCGGGCGCGG CAGTGCCGGT GGAGCGCTTT GTCGCGCCCG GTGCGCCGCG CCTGTTCCTG
GTCGGCGTGC GCTACGAATG GGACGGCCGC TGA
|
|---|
| Protein sequence | MARRRCRTRP LRVVPCLSAL ALSAPGSAAA QQATGEAAAD QVRNLQEVTV VAPTPLPGFT
IERQAFAGNA QTATDGDLER VKAPNLTSFL AETMTGVVVN DAQGNPFAQD LLYRGYRLSP
TLGSAQGLSL YLDGVRQNAA LGDVIQWAAI PEAALSTITL VPGSNPLYGL NTLGGALALQ
TKSGETHPGV EADLSIGSYG RARLDVSAGK ALGDGWHAYM AGTGWREDGW RDRSDSDLGN
LFFKLGRSTS GTQWNVSVLG SSSRLSGNGL TPDSLYAADR RAIYTAPDET RSRSLQVVLN
GAHQFNAQDQ LQLTLYLRQT RTHANSGDIS DAYLDTVLDC QGQAGSGDCE ADDAPPNAVL
NSATVRETGY GASAQWSHDG DTHRFAFGAA LDLNRSHYTQ TTQQASFDSA RNAVADAGAP
VVTQAALDGR DSTVGLFATD TMRLLEGTFL TLAARWNQGR RHTLLNLPTQ SDESFTYSKL
NPSVGLTHRL LDRLVVFGSA SQGTRMPTAI ELGCADPANA CQLPTGLQAD PFLRQVVTRT
LEFGGRWQPA DATEVTLALY RSDNRDDIVF QRSPVSPLGY FSNFPKTRNE GVELGLRQRL
GRLTLRAGYS YTRATYQAQG ELQTPFAAPV AVQPGTRMAG IPLHSFRLGA DWRATAALSV
GGDLLVSSSR PVAGNEDGAL SAQNPALSDT GGYLLLNLRA SWQFSPRWQV YGRIDNVFDR
RYATYGQAGY NLFAGGSLLQ PGAAVPVERF VAPGAPRLFL VGVRYEWDGR
|
|---|
| |