Gene Reut_B5419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B5419 
Symbol 
ID3612974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp2206483 
End bp2208213 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content64% 
IMG OID637694844 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_299608 
Protein GI73539241 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4993] Glucose dehydrogenase 
TIGRFAM ID[TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTCTG TCCCTCGCCT CTCCCGGCAA GCCCTTCCCC TGCTGCTCCT GGCCCTGTTT 
GCGTCCGCCG CGTACGGCGC CGACGAGATC CAGGGCGGCG CGACCACCGC TGGTGCGCCG
ATGTCCAGTG CGCTGCGTCC CGTCACGCAG GCGCAACTCG ACGGGGCGCT CACGAGCAGC
AATGACTGGC TGCATTCGAA CGGGTCGTAC GGCCAGACGC GCTATTACGC GGGCACCCAG
ATCAACACGA AGAACGTCGC CAAGCTCCGG CCCGCGTTCG TGTTCCAGAC CGCGGTGATG
GAGTCGATGG AAACCGCGCC GATCGTCGTC AACGGCGTGA TGTTCCTCAC GACCTCGTAC
AACCACGTCT ACGCGGTGGA CGCGGTGACC GGCAAGGAGT TCTGGCACTA CAAGCACAAG
ATGGGCCCGG TCACGACCTT CTGCTGCGGC CCGAACAACC GCGGCGTGGC CATTAGCGGC
GACCGTCTCT ACATGGGAAC GCTCGACGCG AAGCTGGTTT CGCTCGATGC GAAGACGGGC
AAGCTGCTGT GGGAAACGCA GATTGCCGAT CCTGAACTGG GCTATTCGGA AACCATGGCG
CCGGTCGTGG TCGACGACAA GATCCTGATC GGCACGAATG GCGGCGAATA CGGCATCCGC
GGCTTCGTCA AGGCCTTCAG CGCCAACGAC GGCAAGCTGC TGTGGACCTT CTATACGATC
CCCGACAAGG GCCATGAAGG TGTCTGGGCC ACCAAGGACG CCACCGGCCG CGACATGAAG
CGCAATATCG CCGCGGAAAA GAAGATGCTT TCCGACAAGG GCGGCGACTT CTACAAGACG
CTCGGCGGCG GCGTGTGGAT GGCCCCGGCC GTTGACCGCG CCAACAAGCT GGTGATCTTC
GTGGTCGGCA ACCCGTCGCC GGACCTGTAT GGCGCGATTC GCCCGGGCGA CAACCTGTAC
ACCGACTCGA TGGTCGCGGT CGATCTCAAC ACCGGCGCGT ACAAGTGGCA TTCGCAATAT
ATCGCCCATG ACGTCTGGGA CCTGGACGCC GTGAGCCCGC CGATCCTGGT CGACGTGCGC
GATGAAAAGG GCAACATGAT TCCCGGCGTG ATCCATGGCG GCAAGACCGG GCACGTCTAC
GTGCATGACC GCCGCGACGG GCGCCTGATC CGCTTCTCGG ACGCGATGAT CCCGCAGGAA
AACATGTGGA CGCTGCCAAC CGCGCAAGGC GCACGCATGC TGCCCGGCGC CAACGGCGGC
GTGGAATGGT CACCGATGGC GTTCAACCCG AAGCTGCGCC TGGTCTATGC CGCCAACCTG
CACCAGCCGA TGACGTACCA GGTGGAAGAC GCACCGTACC CGGGCGGCAA GCTTTGGCTC
GGCGGCGCGT TCAAGACGAT CCCGAGCGAG CAGCAGTGGG GCAAGCTGTC GGCGGTCAAT
ATCGACACCG GCAAGGTAAA GTGGGACTTC AAGACCGAGC AACCGCTCAT TGGCGGCGTG
CTGGCGACCG CTGGCGGGCT GGTGTTCAAC GGGGAAGGCA ATGGCTGGTT CCGCGCCTTT
GACGCAGCCA CCGGCAAGAA GCTGTGGGAA TTCCAGTGCG GCGCGGGCGT CAACGCGCCG
GCGGTGTCCT ACATGGTCGG CGGCAAGCAG TACATCGCCG TGGCAGCGGG CGGCAATACG
CAGCTCGACT TCAAGCGCGG TAACAGCGTG TTCGTCTTTG CCGTGCAATA A
 
Protein sequence
MLSVPRLSRQ ALPLLLLALF ASAAYGADEI QGGATTAGAP MSSALRPVTQ AQLDGALTSS 
NDWLHSNGSY GQTRYYAGTQ INTKNVAKLR PAFVFQTAVM ESMETAPIVV NGVMFLTTSY
NHVYAVDAVT GKEFWHYKHK MGPVTTFCCG PNNRGVAISG DRLYMGTLDA KLVSLDAKTG
KLLWETQIAD PELGYSETMA PVVVDDKILI GTNGGEYGIR GFVKAFSAND GKLLWTFYTI
PDKGHEGVWA TKDATGRDMK RNIAAEKKML SDKGGDFYKT LGGGVWMAPA VDRANKLVIF
VVGNPSPDLY GAIRPGDNLY TDSMVAVDLN TGAYKWHSQY IAHDVWDLDA VSPPILVDVR
DEKGNMIPGV IHGGKTGHVY VHDRRDGRLI RFSDAMIPQE NMWTLPTAQG ARMLPGANGG
VEWSPMAFNP KLRLVYAANL HQPMTYQVED APYPGGKLWL GGAFKTIPSE QQWGKLSAVN
IDTGKVKWDF KTEQPLIGGV LATAGGLVFN GEGNGWFRAF DAATGKKLWE FQCGAGVNAP
AVSYMVGGKQ YIAVAAGGNT QLDFKRGNSV FVFAVQ