Gene Reut_B5412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B5412 
Symbol 
ID3612478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp2199558 
End bp2200496 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content68% 
IMG OID637694837 
Producttype II secretion system protein 
Protein accessionYP_299601 
Protein GI73539234 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4965] Flp pilus assembly protein TadB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.246566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCTT CGATGTCTAG CGCCACGCTG CTGCTTGCGG CCATGGCCCT GGGTGTCACC 
AGCCTGGGGT TGCTGCTGCT GGCCAACGCG CAGGCGCGCG CCCGCAAGGA GCAGGCCGAT
GCCTTCGTGC GCGCGCAGAC GGAGCAGGTC CGGCTGCGCT ACGCGGCGGG GCAGGATCCC
CAGCTGCAAC AGCCGGCCAG GGACCTCAAG CGCCGCTGGG AGGACTTCCT GCGCCGCGCC
GACCTGGTAC CGAACCGGCG CACTTACGTG AAGTGGGGCG GGCCTTGCGT GCTGCTCACG
CTGGCGGCAC TCGCGTCAGG CGGCGTGCTT GGCGCCGCGG CCATGGCGGT GGTCTGCGCC
GCGGTGAGCG CGTTCGTGCT GTGGAACCGG GTGCGGCGCA TCCGCCAGAA GATGCTGCTG
CAACTGCCTG GATTTCTCGA TGGCGTGGTG CGCCTGATGA CCATTGGCAG CAGCGTGCCG
GCGGCGTTCC AGAATTCCAT CGCGAACACC GATGCGCCGC TGCGCCAGTG CCTGGTGCAG
GCGGTGCATT TGCAGCGTGC GGGCAAGGAA CTCGATCAGG CGGTGCTGCA GATGGGCCGC
ATCTATCACC TCCAGGAGCT GGTGTTGCTG GCCTCCGTGC TGCGGTTGTC GGTGCGCTAT
GGCGGACGGG CCGATGTGAT GATGGAGCGC ACCGCGGCCT TCATGCGCGA CCGCGAGCAG
GCCCAGCGCG AGCTGATGGC GTTGTCGGCG GAAACCCGCC TGTCCGCGTG GATTCTGGGT
CTGTTGCCGC TGGTGGTGGG CGGGGGGCTG TTCGTGCTGA ACGCGGGCTA CGTGCTGATG
ATGTGGCGGG ACCCGACCGG AAAGACCATG CTGCTGACCG CGCTTGCGCT GGAGATCGCC
GGTGCGTTCA TGCTGTACCG GCTGGCCAAG TCGATCTAG
 
Protein sequence
MTASMSSATL LLAAMALGVT SLGLLLLANA QARARKEQAD AFVRAQTEQV RLRYAAGQDP 
QLQQPARDLK RRWEDFLRRA DLVPNRRTYV KWGGPCVLLT LAALASGGVL GAAAMAVVCA
AVSAFVLWNR VRRIRQKMLL QLPGFLDGVV RLMTIGSSVP AAFQNSIANT DAPLRQCLVQ
AVHLQRAGKE LDQAVLQMGR IYHLQELVLL ASVLRLSVRY GGRADVMMER TAAFMRDREQ
AQRELMALSA ETRLSAWILG LLPLVVGGGL FVLNAGYVLM MWRDPTGKTM LLTALALEIA
GAFMLYRLAK SI