Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_B5409 |
Symbol | |
ID | 3612475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007348 |
Strand | + |
Start bp | 2195524 |
End bp | 2196933 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637694834 |
Product | type II and III secretion system protein |
Protein accession | YP_299598 |
Protein GI | 73539231 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.28985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGTC GAAGCGTAGG CGCCATCCTG CTCCCTGACT CCATGATTCG CGATGCCATG ATGAAGACGC TGCTTGCAGC CATGCTTGCC ACGGCCATGC TAGTGACAGC GATCCCGCGC GCCACAGCGC AAGAGGCCGC GCCGGCGCCG TCTACGCTGC GGTTGATGGC CGGCGCGCAG AAGGAGATCC GCCCCGCGCA GCCGATCGAG CGCGTCGCGG TCGGCAATCC GGCCGTCGCC GACGCGCTGC TTATCAAGCA GCGCAGCGGG CCGCCAGGTG TGTTAGTCGT GGCCAAACAG CCGGGCGTCA CCGATCTGAT GATCTGGCCA AGGGGCGCTG CGCAGCAGAC GTACACGGTG CAGGTGGATG CCATCACCCC GGACACCGGC GGTGCGAATA TCGCGTATTC GGCCGTCGGC GCCACCATTA CCGGCCAGTC GCGTGACGCC TACGCCGCGG CCCGCGCACA GACGGCGGCG CGCGTGGGAT CCGGCAAGGG CGGGGTAGTG GTGGACCGCT CCACCGTGCC GGTCAGCAAC ACGGTCCAGG TCGACGTGAA AGTCGTCGAA ATCAGCAAGA CCGTGCTCAA GGAAGTCGGC ATCAACTTCT TTCGCAACAA TTCCGGCTTT GCCTTCGGCT CGTTCTCGCC GTCAACGCTT AGCAAGTTCA CCTTTACGCC CGGTACGGGC GGTGCCAACG GCAGTTTCAG CGCGGACATC ACGACGCCGA TCAGCAATGC CTTCAACCTG GTCGCGGCCT CCCTGTCGCA CGGCTTCTTC GCCAACATCA GCCTGCTTGA AGCCAATGGC CTCGCGCGCG TGCTGGCCGA GCCGAGCCTG GTGGCGCTGT CCGGCCAGAG CGCAAGCTTC CTGTCCGGCG GCGAGATCCC CATCCCGGTG CCGCAGGCCC TCGGCACGAC CACCATCCAG TTCAAGCCGT TCGGCATCGG GCTGACGGTG TCACCCACGG TTCTGTCGGA CCAGCGCATT GCGCTCAAGG TGGCGCCAGA GGCAAGCGAC CTCGATCCGT CGCGTGGCAT TGCCATCAAC GGTGCCATCG TGCCGGCCAT TGTCACGCGG CGTGCCGATA CCACGATCGA GCTGGGCGAC GGCGAGAGTT TCGTGATCGG CGGGCTGGTC AGCCGCAATA CCGTCAGCAA TGTGAACAAG GTGCCCTTCC TGGGCGACCT GCCTGTCATC GGACCGTTCT TCAAGAACCT GAACTTCCAC CAGGAAGACA GAGAACTGAT GATCGTGGTC ACCCCACGGC TGGTGAAGCC GCTGGCCCGG GCGGCGCCGG CAGTCGCTGC GATCGGCGGC GACGGCCGCA CCAGCGCCGA CCCGGCGGTA TGGGGCAAAT TCGTGGCGGG CGAGTACGTG GATCCGTCGC TGCCGGGGTT CTCGCGCTAG
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Protein sequence | MIRRSVGAIL LPDSMIRDAM MKTLLAAMLA TAMLVTAIPR ATAQEAAPAP STLRLMAGAQ KEIRPAQPIE RVAVGNPAVA DALLIKQRSG PPGVLVVAKQ PGVTDLMIWP RGAAQQTYTV QVDAITPDTG GANIAYSAVG ATITGQSRDA YAAARAQTAA RVGSGKGGVV VDRSTVPVSN TVQVDVKVVE ISKTVLKEVG INFFRNNSGF AFGSFSPSTL SKFTFTPGTG GANGSFSADI TTPISNAFNL VAASLSHGFF ANISLLEANG LARVLAEPSL VALSGQSASF LSGGEIPIPV PQALGTTTIQ FKPFGIGLTV SPTVLSDQRI ALKVAPEASD LDPSRGIAIN GAIVPAIVTR RADTTIELGD GESFVIGGLV SRNTVSNVNK VPFLGDLPVI GPFFKNLNFH QEDRELMIVV TPRLVKPLAR AAPAVAAIGG DGRTSADPAV WGKFVAGEYV DPSLPGFSR
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