Gene Reut_B5409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B5409 
Symbol 
ID3612475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp2195524 
End bp2196933 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content66% 
IMG OID637694834 
Producttype II and III secretion system protein 
Protein accessionYP_299598 
Protein GI73539231 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4964] Flp pilus assembly protein, secretin CpaC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.28985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGTC GAAGCGTAGG CGCCATCCTG CTCCCTGACT CCATGATTCG CGATGCCATG 
ATGAAGACGC TGCTTGCAGC CATGCTTGCC ACGGCCATGC TAGTGACAGC GATCCCGCGC
GCCACAGCGC AAGAGGCCGC GCCGGCGCCG TCTACGCTGC GGTTGATGGC CGGCGCGCAG
AAGGAGATCC GCCCCGCGCA GCCGATCGAG CGCGTCGCGG TCGGCAATCC GGCCGTCGCC
GACGCGCTGC TTATCAAGCA GCGCAGCGGG CCGCCAGGTG TGTTAGTCGT GGCCAAACAG
CCGGGCGTCA CCGATCTGAT GATCTGGCCA AGGGGCGCTG CGCAGCAGAC GTACACGGTG
CAGGTGGATG CCATCACCCC GGACACCGGC GGTGCGAATA TCGCGTATTC GGCCGTCGGC
GCCACCATTA CCGGCCAGTC GCGTGACGCC TACGCCGCGG CCCGCGCACA GACGGCGGCG
CGCGTGGGAT CCGGCAAGGG CGGGGTAGTG GTGGACCGCT CCACCGTGCC GGTCAGCAAC
ACGGTCCAGG TCGACGTGAA AGTCGTCGAA ATCAGCAAGA CCGTGCTCAA GGAAGTCGGC
ATCAACTTCT TTCGCAACAA TTCCGGCTTT GCCTTCGGCT CGTTCTCGCC GTCAACGCTT
AGCAAGTTCA CCTTTACGCC CGGTACGGGC GGTGCCAACG GCAGTTTCAG CGCGGACATC
ACGACGCCGA TCAGCAATGC CTTCAACCTG GTCGCGGCCT CCCTGTCGCA CGGCTTCTTC
GCCAACATCA GCCTGCTTGA AGCCAATGGC CTCGCGCGCG TGCTGGCCGA GCCGAGCCTG
GTGGCGCTGT CCGGCCAGAG CGCAAGCTTC CTGTCCGGCG GCGAGATCCC CATCCCGGTG
CCGCAGGCCC TCGGCACGAC CACCATCCAG TTCAAGCCGT TCGGCATCGG GCTGACGGTG
TCACCCACGG TTCTGTCGGA CCAGCGCATT GCGCTCAAGG TGGCGCCAGA GGCAAGCGAC
CTCGATCCGT CGCGTGGCAT TGCCATCAAC GGTGCCATCG TGCCGGCCAT TGTCACGCGG
CGTGCCGATA CCACGATCGA GCTGGGCGAC GGCGAGAGTT TCGTGATCGG CGGGCTGGTC
AGCCGCAATA CCGTCAGCAA TGTGAACAAG GTGCCCTTCC TGGGCGACCT GCCTGTCATC
GGACCGTTCT TCAAGAACCT GAACTTCCAC CAGGAAGACA GAGAACTGAT GATCGTGGTC
ACCCCACGGC TGGTGAAGCC GCTGGCCCGG GCGGCGCCGG CAGTCGCTGC GATCGGCGGC
GACGGCCGCA CCAGCGCCGA CCCGGCGGTA TGGGGCAAAT TCGTGGCGGG CGAGTACGTG
GATCCGTCGC TGCCGGGGTT CTCGCGCTAG
 
Protein sequence
MIRRSVGAIL LPDSMIRDAM MKTLLAAMLA TAMLVTAIPR ATAQEAAPAP STLRLMAGAQ 
KEIRPAQPIE RVAVGNPAVA DALLIKQRSG PPGVLVVAKQ PGVTDLMIWP RGAAQQTYTV
QVDAITPDTG GANIAYSAVG ATITGQSRDA YAAARAQTAA RVGSGKGGVV VDRSTVPVSN
TVQVDVKVVE ISKTVLKEVG INFFRNNSGF AFGSFSPSTL SKFTFTPGTG GANGSFSADI
TTPISNAFNL VAASLSHGFF ANISLLEANG LARVLAEPSL VALSGQSASF LSGGEIPIPV
PQALGTTTIQ FKPFGIGLTV SPTVLSDQRI ALKVAPEASD LDPSRGIAIN GAIVPAIVTR
RADTTIELGD GESFVIGGLV SRNTVSNVNK VPFLGDLPVI GPFFKNLNFH QEDRELMIVV
TPRLVKPLAR AAPAVAAIGG DGRTSADPAV WGKFVAGEYV DPSLPGFSR