| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5404 |
|---|
| Symbol | |
|---|
| ID | 3612470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 2191688 |
|---|
| End bp | 2192842 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637694829 |
|---|
| Product | putative hemagglutinin-related transmembrane protein |
|---|
| Protein accession | YP_299593 |
|---|
| Protein GI | 73539226 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.809813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACA ACAATCGGGT CCAGCGTCCT CTGGCATCTC TGGCAGGCAT CTGCATCTCG
GCACTCGCTT TGCTGGCCGG TTGCGCATCG GGTGGTGGCG GTGATTCGGG GCTCGGCCCC
AAGGGTGACG GGGCCAATCC GCCGCCGCAG CAGCCGCCGG CGTCGGCGTC CGACAGCACA
CCGGCTGCGA AGGTGATCGA AAGCACGGGC CACACCGTCA TGGCCGCCGG CAATGCCGTC
AGCGATATCG GCAAACAGAT TCAGGATGCG CCGATTCCGC TTCTGCCGGC GCAAGCGCGC
TATGGCGCCG GCGGCGTGGT CATCAATGCC GGCGAGACCA TCGGTGCCCT GGGCGCCGCC
CACGACGGCC TGGGCAAGAT GGGCTCGGTT TATAACCCTG TCGGCGTCAC CGTGACCAGC
ACCGGCAACG TCGTGCAGGA GGCAGGAGAC ACCGTGACGA GTGCCGGCCA ACTGATCAGC
GGCGTCGGCA CGGACCGGCT TTCACCGCTC GAACCCGTGA CGGCGCCGGT TGGAGGCGCT
GTCCAGAAGG TCGGCATGGC CGTGTCGTAT GGCGGCGTCA AGCTGGGCGA GGCGCTTTCC
GCAGGCCCGG TCGCGCAGCT TACCGAAGCC TCGAGCAAGG CAATCGTGCC GCTGACGACC
AGCCTGACTG ACGCCACGCA GACCGCGGGT GGAGCGACCG GCATGGGGAT GCCGGTGGAT
AGCTTGCTGT TCAAGGTTGG CCATAACGTC GCGGCCGGCG CAGGACTGTT CGCCAATACC
CCTGCCCCGG CGGTGTCCGG CCTCGGCGGC GCCGTCGCCG AAACCGGCAA GACGATGGCC
GTTGCGGGCG GGCTGGTGCA TGGCGCTCCT TCGGGCGGTG GCAATCCGCT TGGCGGCCTC
GTGAACACGC TGCCGCTCGT CGGCCTGGGC GGAAAGCCCG GCAGCTCGGG GGGCAATGAA
TGCGCCCCCA ATCTGCTGAC TGGCCTGCCG CTCGTTGCCG CCCTGTCTGG CACGTCTCCA
CAGCACGGCA GCAACAGTGC GGGCCTCCTG GCACCGTTGC TGGGGCCAGT GACGGGCCTG
GCTTCCGCCG GTACCAAATA CACAACAGGA GAGGATGGCA AGGGCGCGCC GCCCGCGCGG
GGACTCCCCC GCTGA
|
|---|
| Protein sequence | MNNNNRVQRP LASLAGICIS ALALLAGCAS GGGGDSGLGP KGDGANPPPQ QPPASASDST
PAAKVIESTG HTVMAAGNAV SDIGKQIQDA PIPLLPAQAR YGAGGVVINA GETIGALGAA
HDGLGKMGSV YNPVGVTVTS TGNVVQEAGD TVTSAGQLIS GVGTDRLSPL EPVTAPVGGA
VQKVGMAVSY GGVKLGEALS AGPVAQLTEA SSKAIVPLTT SLTDATQTAG GATGMGMPVD
SLLFKVGHNV AAGAGLFANT PAPAVSGLGG AVAETGKTMA VAGGLVHGAP SGGGNPLGGL
VNTLPLVGLG GKPGSSGGNE CAPNLLTGLP LVAALSGTSP QHGSNSAGLL APLLGPVTGL
ASAGTKYTTG EDGKGAPPAR GLPR
|
|---|
| |