| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5376 |
|---|
| Symbol | |
|---|
| ID | 3614635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 2158246 |
|---|
| End bp | 2160240 |
|---|
| Gene Length | 1995 bp |
|---|
| Protein Length | 664 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637694801 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_299565 |
|---|
| Protein GI | 73539198 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.237133 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATCT ACCCTCCCGT CTGGCTAACG TCCCTTCCTC GTCGTCAAAA GATTGCGCTG
ATGGTCTGCG CGGACCTGAT TGCCCTTCCC GTGTGCTTTT CGCTGGCGCT GTTCCTGCGT
GCCGGCAATA CAGAACTACT CCACCAGTAC GGGTTCTTGC CTTCACTGAT CATCTCGGCC
TGCACAATTC CGGTGTTCTC ATACAGCGGA CTGTATCGAA TGGTCGTTCG ATACTTCGAC
CTCAGGGTCC TGTGGGTCTC CGGTGCAAGC CTGGCTTGTC TGGTTGCCCT GACTTACGCG
CTATCTTATC TCGTGACTAT CGGCCACCTT CCCAGGACCG GCCTCCTCAT CTACTGGTTC
ATCGCGTTCT CATACGTCGT CATCTCGCGC TTCCTGGCGC GGGCCGTCAT CACGCGCGCG
CAACAGCGCA AACAGACAGG CGACCGCGAT GTCCTGCGGG TTGCCATCTT CGGTGCTGGT
GAAGCAGGGG CGCAACTAGC CACCGCCATG CGCGCAAGCT CGGGCCACCG ACCTGTCTGC
TTCTTCGATG ACGACATCTC ACTCGACAAG AAGATCTTCT CCGACCTCCC TGTGTACTTC
AGCGACAACA TGAAGGACCA GATCAACCAG TTGGGCATCA ACGAGGTCGT GCTCGCAGTT
CCCTCTCTCT CCATCAAGCG TCGCAAGCAA ATCGTTGACA AGCTGCACCG GTACGCAGTC
AGTGTTCGAA CGCTCCCGAC ACTGCTTGAG CTTGTCGACC GCAAGATCAC CATGCAGTCG
GTGCGAGACA TCAAGATCGA GGATTTGCTG GGCAGGGATA TCGTGCCGCC GCGAGAAGAG
TTGTTTGCAA GATGCACCCA CAGAAAAGTC GTGATGGTTA CGGGCGCAGG AGGTTCCATC
GGCAGTGAAT TGTGCCGGCA GATCGCCAGC CGCCAACCCA GCAAGCTCAT ACTGTTCGAT
CATTCCGAAT TCGCGCTATA CGTCATAGAG CAGGAGCTGC GGCGCACGTT TCCCGAGTTG
CAGATCGTCG CGCGCATCGG CTCTGTCTGC GACGTCGAAG CCGTGGCGGC CGCCATGCGG
GGTCAAAGGA TCGATTCGAT CTATCACGCC GCGGCCTACA AGCATGTACC GATGGTTGAG
GCCAACATGC CAGAGGGCAT ACGCAACAAT GTCCTTGGGT CCGCAACGAT CGCCAACATG
GCCGATCATT TCGGCGTAAA GACGTGCGTC TTGATTTCCA CGGACAAGGC GGTACGTCCA
ACCAACATCA TGGGTGCCAG CAAGCGCATT GCAGAGTTGG CGTTTCAGGC TGCCGCGTCA
CGGCCGAATA CGAGCACCAC GTTTTCGATG GTTCGCTTCG GCAACGTACT GGGCTCGTCC
GGCTCGGTTG TTCCACTGTT CCGCAAGCAG ATCCGCGCCG GCGGCCCGGT GACCATCACG
CACCCGGACG TCATCCGCTT CTTCATGCTG ATTCCCGAAG CGGCACAGCT GGTCATCCAG
GCCGGCGCCA TGGCCCAGGG CGGAGAGGTC TTTGTCCTCG ACATGGGCAA GCCGGTCAGG
ATTACGGATC TTGCCCGCAC CATGATCGAG ATGTCCGGGC TTGTCGAGAA GACACGCAAG
AATCCCGCTG GCGATATCGA AATCAAATTC GTCGGCTTGC GCCCCGGCGA GAAGCTCTAC
GAGGAGTTGC TGATCGGTGG GGAAGTGACG CCAAGCGAGC ACGAACGCAT CATGTGTTCG
CACGAGCCCT TCCTGGAAGA ATCGGAGTAT CGCGAGAAGC TTGGCAAGCT GTTGGCAGCC
TGTGAATCCC GTGATGATCT CGCGATCCAG CTGGCGGTGC AAAACCTGGT GCCCGAATAC
GCTCCCTACA GCTCGCTGGA CACGCCGCGT GACAGTACAG CGGTTGCGGA CGAGTCCCGG
CAACCGACGC CATTGCCAGT GCTCAATCTG AAGCCCGCGC AAGCCGGGAT CTCCGGAATC
TCTGGCGGCT CCTGA
|
|---|
| Protein sequence | MRIYPPVWLT SLPRRQKIAL MVCADLIALP VCFSLALFLR AGNTELLHQY GFLPSLIISA
CTIPVFSYSG LYRMVVRYFD LRVLWVSGAS LACLVALTYA LSYLVTIGHL PRTGLLIYWF
IAFSYVVISR FLARAVITRA QQRKQTGDRD VLRVAIFGAG EAGAQLATAM RASSGHRPVC
FFDDDISLDK KIFSDLPVYF SDNMKDQINQ LGINEVVLAV PSLSIKRRKQ IVDKLHRYAV
SVRTLPTLLE LVDRKITMQS VRDIKIEDLL GRDIVPPREE LFARCTHRKV VMVTGAGGSI
GSELCRQIAS RQPSKLILFD HSEFALYVIE QELRRTFPEL QIVARIGSVC DVEAVAAAMR
GQRIDSIYHA AAYKHVPMVE ANMPEGIRNN VLGSATIANM ADHFGVKTCV LISTDKAVRP
TNIMGASKRI AELAFQAAAS RPNTSTTFSM VRFGNVLGSS GSVVPLFRKQ IRAGGPVTIT
HPDVIRFFML IPEAAQLVIQ AGAMAQGGEV FVLDMGKPVR ITDLARTMIE MSGLVEKTRK
NPAGDIEIKF VGLRPGEKLY EELLIGGEVT PSEHERIMCS HEPFLEESEY REKLGKLLAA
CESRDDLAIQ LAVQNLVPEY APYSSLDTPR DSTAVADESR QPTPLPVLNL KPAQAGISGI
SGGS
|
|---|
| |