Gene Reut_B5346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B5346 
Symbol 
ID3614780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp2117242 
End bp2120424 
Gene Length3183 bp 
Protein Length1060 aa 
Translation table11 
GC content66% 
IMG OID637694771 
ProductPAS 
Protein accessionYP_299535 
Protein GI73539168 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATGA CTTGCGCCGC GATTGCACTC ATTCTTCTTT TGAGCGCCCA TGTGCTTGAG 
ACGCTGCATT CGCAGGAGCG TGCTCGCGTG AAGGCCGAAC GGCAGGCCGC TCTGCATGCC
GTCACGCGCA TGATCGGGAT GCTGAGGGAG GACGGTGAGA CACGGCTGCG GACGATCATC
GAGAACCCGT ACCAGATCGA CCTCGCCCGC CGCATTGCCG CCGCGCCGGG CGACCAGGCC
CTGCGCGCCG AGTATGAGGC GTGGATCACG CCCGTCTTCC GCAGCCGCGG CTTCGAGGGC
TATAGCCTGA TCTCGCCGCA GCGCGTGATT GTCGCTGCCA GCAGCCGCGC CTATGTCGGC
AAGCCGGTAT CGACCGCGGT GGTGATCGAA GCGCTGGCTC GCGCACAGCA CGCTGATTAC
GCGGCGACAC GGCCGAACCG GTCGCCCATG CCGATCCTGA CTGCCGAGGG CGAACAGCCC
CCGGGCACCT TGTTCCAGCA GGTCTGTGCC CGCATCGGCA CGCCGGAGGC GCCAATCGCC
TTCCTTTGCC TGCGTACGGA CCCCCAGGAT CGGCTGTTCG AGATCCTGCG CGTGGGCTGG
TCTGGCAAGA GCGGCAAGGC CTATGTCATC GACGCCGCAG GGCGCCTGCT GTCGCCCGGG
CTGCCTGGCG ACAGAGCATT GCAGCCATCG GCGAAGCCAC GGGTATCAGC GCCCTTCGGC
CTGTGGGCGC AAGTCCCGAC CCGGCCGCGC GGTGGCGGGC CATCGGTGCC TGCCGACGGT
AACGGACAAC TGACCGAATT GGCTGCTGCG CTGATCGATG CCAGGGACGG CGAGACGCGC
GTATTCGATC ACTACCTCGA CTATCGCGGC CGCCGCGTCA TCGGCGTGGC CCATTGGTTT
CCCGACACCG CAATGGGTGT CATTGTCGAA CTCGACACCG ATGAAGCGTA CCGCTCGTTC
CATCTGGCGC GCCAGGCAAT CATCGCGCTG ACCGCGCTCG CCATTTGCCT GATCCTTGCG
CTGACCGCCT TGCACTGGCG CAGCCGCCGG GAAATGCGCC AGAACGCGGA GCGCTGGCAG
GCCTTTCGCA AGAACGTGCC GGCGGGCCTC GCCTACATGA GCCCAGGCGG CAGGGTCGAT
ATGGCTAATG ATATCTACTG CGAATTCGCC GGCCTTCCCC TCCATGACCT GCTGGGTAGG
AACGCGTGGA CGGCCTTGCC CGACCGGCGC GTCGCAGGCA TCTGCGAGCG CGGCCATGCC
GACGTGCTGC GCACAGGCCA AACGCACGTG GACGAGCATA CGCTGAATGT GCGCGCGCAC
GGGCAACGGG TCTACCGCGT CGCGAGGTTT CCGGTCCGCA GCCGCCATGA CGCAGTCATC
ATGGGCGTCG GCACCGTGGT GACCGACATC TCCGAACAGG AACGGACGCG CCAGGCGCTG
GAAAACCTGG CGAGCACGCT CGAATGGAAA GTGGCCGAGC GCACGCGCGA ACTGATGGAG
GCGCGCGAGT CGGCGGAAGC GGCGGCGCGG GCCAAGTCGC AGTTCCTGGC GAACATGAGC
CACGAGATCC GGACCCCGCT GAATGGCATC AGCGGCATGA CCCATCTCGC GATCGGCGAG
CCGGACAGCG GCAGGCAGGG GCAATACCTC GCGCGCATCG AGGAGTCTTG CCAGCACCTG
CAGCGTATCG TCAATGACAT CCTCGATTTC TCGAAGATGG AGGCAGGCAT GCTGGCAGTC
GATGCCGCGA GCTTCCCGCT TGCGCGCCTG CTGGACCATG TCTTGTCCCT GTTCCGCGAG
CAGGTCCGCA AGAAAGGCCT GGTCTTGCAG ATGGAGGTCG ATCCCGCGCT GCCGCTCCAT
GTCATCGGGG ACTCCCAGCG CATCGGGCAG ATCCTGATCA ACCTGCTTGG CAATGCGCTC
AAGTTCACCG ATGCCGGCGA GATCCGCTTG CGGGTGCGCG CATGCAATGC CGATGACGAC
ACCGTGGCCG TGCGCTTCGA GGTCAGCGAC ACGGGAATCG GCATTGCCGA AGATGCCTTG
CTCGTATTGT TCAGCCCGTT CCACCAGGCC GACAGTTCGG CCGCGCGGCG CTTCGAGGGA
ACGGGCCTTG GCCTGGCGAT CAGCAAACGA CTTGCCGAGT TGATGGGTGG TCGCATCACC
GTGCAGAGCC AAGCAGGTGT GGGCAGCTTA TTTACGCTCG AGATCGGTCT TGGCGTTTCG
AAACCGCCCG CATGGCAAGG CCGCGCTGCA CGCCTGCCGG CCGTCACGCC AAAACAGGAC
GCCGTCCAGT CTTCGGCAGA ACACGTGCAC GACGATCTGC CTGGCGCTGC ACGCACCGCG
ACACCGCACG CCCTGCGCGG ACGCACGGTG CTGCTGGTGG AGGACAACCC GATCAACCAG
GAAGTCGCGC AGGCGCTGCT GACGCAGGCC GGCATGCAGG TCACGCAAGC GAACAACGGC
CAGCATGCGC TGGGCCTGCT CGCACAAGGG CGCTTTGATC TGGTACTGAT GGACGTCCAG
ATGCCCATGC TGGACGGGCT CGAAACCACG CAGCGCATCC GCCGCGATCC GCGGCACGCC
TCGATGCCGG TCGTGGCATT GACGGCCAGT GCGCTGGAAG ATGACCGGCA GCGCTGCCTG
GCGGCCGGCA TGGATGACTA CGTGTCGAAG CCGATCGAGC CCCGGAAGCT CTACCAGGTC
ATGGCGCGGC TTGTGGGCGG CGATGCACAG TCATTGCAAA GCGCCGCGGC GATCATGAGC
ACGCCAGCGC AAGCCGTCGC GAAAGTTCCG TGCATCGTAT CGCTGCGCGC GATCCCGGCG
CTCGATGTCG GGCCGGCACT CGAACGGCTG CAGGGACGCC GCGAGATCTA CGTCGGGCTC
GTGCAGCGCA TTCTTGCCGA GCGAATGGAC TTCCACCGGC AGTTGCATCA GGCCGTATCC
GAAGCGCGCT ACCGCGATGC GAGCCTGCTT GCGCACAATA TGCACGCGAT CCTGGCCACG
CTCGGCGCGG TGGAACTCGC CCCGATGCTT CGCACGCTGG AGCGCCAGCT CCTCGACGAC
CGGCCCGACG AAGCGCTGCT ATCCGCGTTC ATGGACCAGT TTGAATCGCT GCTGTCGTCG
CTGTCGACCG CGCTGAAGTT CGTCGACGCG CCGACGCCGA CGCAGTCCTG CGCCGCTGAG
TAG
 
Protein sequence
MGMTCAAIAL ILLLSAHVLE TLHSQERARV KAERQAALHA VTRMIGMLRE DGETRLRTII 
ENPYQIDLAR RIAAAPGDQA LRAEYEAWIT PVFRSRGFEG YSLISPQRVI VAASSRAYVG
KPVSTAVVIE ALARAQHADY AATRPNRSPM PILTAEGEQP PGTLFQQVCA RIGTPEAPIA
FLCLRTDPQD RLFEILRVGW SGKSGKAYVI DAAGRLLSPG LPGDRALQPS AKPRVSAPFG
LWAQVPTRPR GGGPSVPADG NGQLTELAAA LIDARDGETR VFDHYLDYRG RRVIGVAHWF
PDTAMGVIVE LDTDEAYRSF HLARQAIIAL TALAICLILA LTALHWRSRR EMRQNAERWQ
AFRKNVPAGL AYMSPGGRVD MANDIYCEFA GLPLHDLLGR NAWTALPDRR VAGICERGHA
DVLRTGQTHV DEHTLNVRAH GQRVYRVARF PVRSRHDAVI MGVGTVVTDI SEQERTRQAL
ENLASTLEWK VAERTRELME ARESAEAAAR AKSQFLANMS HEIRTPLNGI SGMTHLAIGE
PDSGRQGQYL ARIEESCQHL QRIVNDILDF SKMEAGMLAV DAASFPLARL LDHVLSLFRE
QVRKKGLVLQ MEVDPALPLH VIGDSQRIGQ ILINLLGNAL KFTDAGEIRL RVRACNADDD
TVAVRFEVSD TGIGIAEDAL LVLFSPFHQA DSSAARRFEG TGLGLAISKR LAELMGGRIT
VQSQAGVGSL FTLEIGLGVS KPPAWQGRAA RLPAVTPKQD AVQSSAEHVH DDLPGAARTA
TPHALRGRTV LLVEDNPINQ EVAQALLTQA GMQVTQANNG QHALGLLAQG RFDLVLMDVQ
MPMLDGLETT QRIRRDPRHA SMPVVALTAS ALEDDRQRCL AAGMDDYVSK PIEPRKLYQV
MARLVGGDAQ SLQSAAAIMS TPAQAVAKVP CIVSLRAIPA LDVGPALERL QGRREIYVGL
VQRILAERMD FHRQLHQAVS EARYRDASLL AHNMHAILAT LGAVELAPML RTLERQLLDD
RPDEALLSAF MDQFESLLSS LSTALKFVDA PTPTQSCAAE