| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5341 |
|---|
| Symbol | |
|---|
| ID | 3614775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 2111617 |
|---|
| End bp | 2112711 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637694766 |
|---|
| Product | plasmid encoded RepA protein |
|---|
| Protein accession | YP_299530 |
|---|
| Protein GI | 73539163 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.921564 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCA AACGCTCCCC GGTCGCCGCG GGGGATCGCT CCGTCCTGGA TATGGACGGC
GAGCCATCCC GCATCATTGT TCCCGGCAAC GAGAACAACC TGGTTCCGTC CGAAAAATTC
CAACGCCTGT TCGACGAGGC GCAGGCCATG GAGCGCGAAG ACGCCTGGCA AAGCGGCGAA
GTCGGTTTCC TGAGCCGGGC CAGTGTCCAG GTGACGTTGC CCTATCGCGC GCCCAAGGGC
GCGCCGCCGG TGTGGACGCG TACGAGCGGC AACATCTCGC TGATGATCCA GCCCGGCTAC
TTCACGCAGC AGCGGTCGGA GCGCGCCAGC AATGGCCGGC AGAAACTTGT GTCGGAAACC
GTGTCGCTCG GTTACCCCTA TGGCTCGTAT CCCCGCCTGA TGCTTGCTTG GATCGGCAAG
GAGATCATGG CCAAGAAGAA GCGGGGCGAA TTCACCGGCA CGGTTGAGGA CCGCCGCATC
TCGCTGGGCA ATTCCCTGTC GGAGTTCATG TACAACCTCG GCATTCCGAT GGCCACTGGC
GGCAAGCGCG GGACCATGAC GCTGGTACGC CAGCAGATGA TCCGGCTGTT CTCGGCCACG
ATTGCGATCG TGCAGAACAA GTCGATGCCG AGCCAGAATC AGACCAGCAA CCACGAACCG
CTGTCGATCG ATCGCGTTGG TTACCTGCTG GCTGATCAAC TGTCGACGTG GTGGGATCCC
ATGCAGCCCG GGCAGGGCTC CATGTTCGAG AGCTTTGTGG TGTTGTCCGA ACCCTTCTTC
AACGAGCTGG TCAACCGACC CGTGCCGGTC GATATGCGCG CACTGAAGGC GCTCAAGCAG
TCGCCCTTCG CGCTGGACGT CTACTCTTGG CTGACGTACC GGTTCTTTAC GATCCAGCGG
CGTACGGAGA TCCCCTGGGA GGCCCTGCAA ATGCAGTTCG GCACCGAGAC CGAGAGCGAA
CGCAAGTTTC GCGCGTTGTT CCGCAAGGCG CTGAAGGATG TGCTCGTGGT GTATCCGGGT
GCCAAGGTCG ACGCGGACTC GTCAAAGGCC CTGATCCTGC AACCGTCGAG GACCAGCGTC
CGCAAGCTCG GCTGA
|
|---|
| Protein sequence | MPIKRSPVAA GDRSVLDMDG EPSRIIVPGN ENNLVPSEKF QRLFDEAQAM EREDAWQSGE
VGFLSRASVQ VTLPYRAPKG APPVWTRTSG NISLMIQPGY FTQQRSERAS NGRQKLVSET
VSLGYPYGSY PRLMLAWIGK EIMAKKKRGE FTGTVEDRRI SLGNSLSEFM YNLGIPMATG
GKRGTMTLVR QQMIRLFSAT IAIVQNKSMP SQNQTSNHEP LSIDRVGYLL ADQLSTWWDP
MQPGQGSMFE SFVVLSEPFF NELVNRPVPV DMRALKALKQ SPFALDVYSW LTYRFFTIQR
RTEIPWEALQ MQFGTETESE RKFRALFRKA LKDVLVVYPG AKVDADSSKA LILQPSRTSV
RKLG
|
|---|
| |