Gene Reut_B5178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B5178 
Symbol 
ID3614612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp1919061 
End bp1920434 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content63% 
IMG OID637694604 
Productmajor facilitator transporter 
Protein accessionYP_299368 
Protein GI73539001 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACACA CCCCACTCGA GCTGATGCGC GTGCGCACCG GCGACCGGCT GGAACGGCTA 
CCCGTATGCG GTTACCACCG ATTCCTGTTT GCCGTTATTG CACTGGCCTT CTTCTTCGAC
AATCTCGACC TGGCCATGAT GACCTATCTC CTGGGATCGA TCCGCTCGGA ATTCGGATTG
ACTCCCGCAC AGGCCGGCAT GCTCGGCAGC GCTAGCTTCG TCGGCATGGC TGTCGGTGCG
CTCGGCTCCG GGGTACTGGC GGACAGGTTC GGCCGGAAGC CGGTTTTCCA GGTCAGCATG
ATCATCTGGG GCGTTGGCAG CTACCTCTGC TCCACCGCGC ACAGTCCGAC GGAACTTGGC
GCGTATCGGG TCTTGCTTGG CCTGGGCATG GGCATGGAAC TTCCTTTGGC CCAGACGCTG
ATGTCGGAAT TCATTCCGGC GCGCCAGCGC GGCAAGTACC TGGCACTGAT GGATGGAAAC
TGGCCGATTG CCTTCATTTG CGCGGGCATG ATGTCGTACT ACGTGTTGAG CGCATATAGC
TGGCGCACGA TGTTCCTGCT CGGCGCGGTA CCGGCGCTCT TCCTCCTTGT CATCCGCCGC
TACGTGCCGG AGTCCCCTCG CTGGCTGGAA TCGCGAGGCC GGCATGCGGA GGCGGCCGAC
ATCGTCGAGC GGATCGAGCA ATCGGTGATG CGGCGGATGA AGCTGCATGC GTTGCCCGAA
GTCACTCCCA TGGTTGCCGC GCCGGAGCCG GCTGCATCGG GCCTTCGCGT GCTCTGGTCC
CGCGAGTACC GCAGTCGGAC GTTGACGGTA TGGGGTCTGT GGTTCTTTGC CCTGCTGGGG
TTCTATGGTC TGAACACCTG GATTGGCGCA TTGTTGCAGC AGTCCGGGGT GGGGGTGACC
AAATCGGTCT TGTATACGGT CTATATTTCC ATCGGGGGCA TTCCGGGGTT CCTCTGGGCC
GCCTGGGCAG TGGAGCGCTG GGGACGCAAG CCTGCCTGCG TCGCGACGCT GGTGGGCGGT
GCCTGCATGG TGTTCATCTA CGGCAGGGTG GCCGGTTCCC ATTCTGAAGC CTTGGTGCTG
TTCCTTTCAG GCGGCATGAT GCAGTTTTTC ATGTTCGGCA TGTGGGCGGT GCTCTATACC
TACACGCCTG AGCTCTACCC CACGCGCGCA CGCGCCTCTG GTTGCGGAAT GGCATCGACG
GTCGGCCGGG TGGGTTCGTT GCTCGGCCCG GCGCTGGTGG GCCTGATACT GCCTGTCGCC
GGGCAAGCTG GCGTGTTCTG CCTTGGCGCG TTGTGCTTCC TTGCGGCGGC GGGGATCGTG
TGCCGGTTCG GCATCGAGAC CCGGGGACGA GCGCTGGAGA CCATTGCTGA CTGA
 
Protein sequence
MKHTPLELMR VRTGDRLERL PVCGYHRFLF AVIALAFFFD NLDLAMMTYL LGSIRSEFGL 
TPAQAGMLGS ASFVGMAVGA LGSGVLADRF GRKPVFQVSM IIWGVGSYLC STAHSPTELG
AYRVLLGLGM GMELPLAQTL MSEFIPARQR GKYLALMDGN WPIAFICAGM MSYYVLSAYS
WRTMFLLGAV PALFLLVIRR YVPESPRWLE SRGRHAEAAD IVERIEQSVM RRMKLHALPE
VTPMVAAPEP AASGLRVLWS REYRSRTLTV WGLWFFALLG FYGLNTWIGA LLQQSGVGVT
KSVLYTVYIS IGGIPGFLWA AWAVERWGRK PACVATLVGG ACMVFIYGRV AGSHSEALVL
FLSGGMMQFF MFGMWAVLYT YTPELYPTRA RASGCGMAST VGRVGSLLGP ALVGLILPVA
GQAGVFCLGA LCFLAAAGIV CRFGIETRGR ALETIAD