| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5054 |
|---|
| Symbol | |
|---|
| ID | 3613454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 1792194 |
|---|
| End bp | 1793036 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637694482 |
|---|
| Product | taurine dioxygenase |
|---|
| Protein accession | YP_299246 |
|---|
| Protein GI | 73538879 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTCA ATCCACTTAC CTGTTCGATC GGCGCCGAGC TGACCGGCGT GCAGCTTGGC
AATGTCGCGC GCGACGATTC GCTGCATGCG GAGATCAAAG CGCTGCTGCT CAAGCACCGC
GTACTGTTCT TCCGCGACCA GGAGATGACG CGCGACGACC ACGTCGCGTT CGCGAAGCGC
TTCGGCGACC TGGAAGACCA CCCCGTCGCC AATACGGTTC CTGGCTATCC GGGTCTCATC
GAGATCGTCA AGAGCGAGAA GCGGGACCAT TTCGAGAACA CCTACCACAG CGATGCCTCG
TGGCGCGCGA ATCCTCCCAG GGGTGCGGTG TTGCGTTGCA TCTCCTGCCC GGAGGTTGGC
GGCGACACGA TCTGGGTGAA CATGGTCGAC GCCTACAAGA ACCTGCCCGA AGAGATCAAG
CAGAAGATCG AAGGGCTGCG CGCCAAGCAT GGCATCGAGC ATTCGTTTGG CGCGATCATG
TCGACCGAGG AGCGCGAGGA ACTGGTGCGC AAGCACCCGC TGGTCGATCA TCCCGTGGTC
CGGACGCATC CGGACACCGG CGAGAAGATC TTGTACGTGA CGCCGTTCTC CACGCACTTC
ATCAACTACC ACACGCCCGA GAACGTGCGC TTCGGACAGG ACAAGACGCC CGGCGCGAGC
CTGCTGCTGA ACTACCTGCT GAGCCAGGCC GCGATTCCGG AGTACCAGGT GCGTTTCCGC
TGGCGGCCGA ACAGCGTGGC GATCTGGGAC AACATGGCCA CGCAGCATTA TGCGGTCAGC
GACTATTGGC CGGCCCCGCG CAGGATGGAG CGCGCCACCA TCATGGGGGA TCGGCCGTTC
TGA
|
|---|
| Protein sequence | MQVNPLTCSI GAELTGVQLG NVARDDSLHA EIKALLLKHR VLFFRDQEMT RDDHVAFAKR
FGDLEDHPVA NTVPGYPGLI EIVKSEKRDH FENTYHSDAS WRANPPRGAV LRCISCPEVG
GDTIWVNMVD AYKNLPEEIK QKIEGLRAKH GIEHSFGAIM STEEREELVR KHPLVDHPVV
RTHPDTGEKI LYVTPFSTHF INYHTPENVR FGQDKTPGAS LLLNYLLSQA AIPEYQVRFR
WRPNSVAIWD NMATQHYAVS DYWPAPRRME RATIMGDRPF
|
|---|
| |