Gene Reut_B5043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B5043 
Symbol 
ID3613658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp1778257 
End bp1780824 
Gene Length2568 bp 
Protein Length855 aa 
Translation table11 
GC content66% 
IMG OID637694471 
ProductPAS 
Protein accessionYP_299235 
Protein GI73538868 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.563138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATGA TACAACGCCC GACTCCCTTT TTTTCAATTT TGGCCCGCGC ACGAGCTCCA 
GACCCGGCTC ACGCGCGCCG GCCGCAACTT GCGAGATCGG ATGGGGCAAT GCAGTTCTGT
GCTAGCATGC GCGAAAATAT CATTTATGCG TTAATTAAGT TTCACTTAAA TCATATTAAC
GCCCGACGCT CGCGATCGCA CACCGACGCC AAACGCCCGC TTCCTATGTC AACGTCCGAA
GAGACGCATG TCCCGGCCCG CCTTGGCGAT GACGTCACTG CCCCAACGCA GGCGGCAGAC
CACCGCGACC CATTGCTGGA ACTGTCGCTG GACCTCATCT GCGAGGCCTC GGGCGACGGC
TACTTCACGC GCGTCAATCC CGCCTTCACA AGCGTGCTGG GCTGGCGCGC CGACGAACTA
CTCGCGCGTC CGTTTCTCGA TTTCGTCGCG CCCGAGGACC GGGCGCGTAC GCAGGAACTC
GTCCGGAGCC ATGTCAAAGG GAATCCGATC GAAGATTTCC AGAACCGCTA TCTCTGCAAG
GACGGCGCAG TGCGCTGGCT GTCCTGGCGG GCGGTGCTGC GCGACGACGG AACGCTCTAC
GCCACCGCGC GCGATGTGAC CCAGAGCCGC ATCGCCCAGC TTGAAATCGA ACGCGCCCGC
CAGGAGGCTG AGGCAGCGTC GCGCGCCAAA AGCGCCTTCC TCGCGATGAT TAGCCACGAG
ATCCGCACGC CGATGAACGG CGTCATCGGC ATGATCGAAG TGCTCACGCG CACGACGCTC
TCGGCCGATC AGCGCGAGAT GGTGGCGACC GTGCGTGAAT CGGCCGCCGC GCTGCTGAAC
ATCATCGACG ACATCCTCGA TTTTTCGAAA ATCGAAGCGG ACAAGATGCG CATCGAATGC
GTGCCGCTAT CGATCGAACA TACCGTCGAG ACGCTGTGCG CGTCGCTGGT GCTGCTGGCC
GAGCGCAATA ACGTGGCGCT CTATCTCGAC ATCGATCCCG GGCTCCCTGC GCAAGTGCTT
GGCGATGATC TGCGGCTACG GCAGGTGCTC TACAACCTGG TCGGCAACGC GATCAAGTTT
TCCGGCGGGG CGCTGCCCGG CGGCCGCGTC TATCTGCGCA TCGCGCCCGC CGGGGGCGAC
GTGGTCCGGT TCGAGATTGA AGACAACGGC ATCGGCATGC CCCCCGATGC GATGGCGACG
CTGTTCCAGC CATTCGTACA GGCCGAGACC ACGACCACGC GGCGCTTCGG CGGCACGGGC
CTGGGCCTGG CGATCTGCCG CCGGCTCACC GAACTGATGG GCGGTTCGAT CGCGGCGGCG
AGCCAGCCCG GCGCCGGGGC CACCTTCACC GTCTGCCTGC CGCTGCGCGC CGCCGAAGCG
CCGCTGCCAA GGCCAACTCC GATCAGTGGC GTGCACTGCC TCCTCATCGA CATCGCCGAG
CCGCAACGCA CCACCGTCGC ACGTTACCTG CGCCACGCAG GCGCTACGGT AACGGCGCAA
GACGACGTGC CAGCACGCAT CGCCGCGGCT GCCGATGGCA CCGGGGCCGG GGTGCTGCTG
CACGGCGACG ACGCAAGTCC CGCCGCAATC TCCGCGCTTA TCGCGCAGAT GCCCACTGGC
ACCGGGCGTG TGCGCTTGCG TGCAGGCTAC AGTCCAGCCC CGGCATCAGA GGCCGGCAAT
GCCGTTTCGA TCGGCCGGCA TGCATTGCGC CGGCGCACGC TGGAAGATGC CGTGGCGATG
GCTGCGAAGC GCCTGCTGCC GGCGGCCGCG CCACTTGCCG AACCAGAGAT TGCGCAGGCC
AGTACCTCGG CATCGGTACA GGCCCATCGC CTGCTCGTCG CGGAAGACGA CGAGATCAAT
CGCCGTGTGA TCTCGCGCCA GCTCCAGTTG CTCGGCTACC GTGTCGACTT CGCCGCTGAT
GGCGCCGACG CGCTCGACCG GTGGCGCCGT GGCAGCTATG CGCTGCTGCT GACCGACCTG
CATATGCCTC GGCTCGATGG CTATGCGCTG TGCGACCAGA TCCGCGCCGA AGAAGCCCAG
GCCGGCCGGA CACGCATGCC CGTCATCGCG CTGACCGCTA ACGCGATCAA AGGGGAAGCG
TTGCAGGCGC GGGATATCGG CATGGATGAC TACCTGGCCA AGCCACTGAC GCTGTCCGCG
CTGCAGCAGA CCCTTGCGCA CTGGCTGCCG TCGCCCTCGC CTTCGCTGGC GGGGCCGATG
CCCACGGCCG GCCCGCATGC ATTGCCCGTC TTCGATGCGG AAGCGCTCAG GGCCTTTGTC
GGCGACGACG CCGCTGCGAT TCGCGAACTG CTGGACGAAT ATGAACGTGC TGCCCAGACG
ATTGCCGCCA GCATCCGGCG CGATATCGCC GCACAGCGCG CGGACGGCGT CGCGCATGGC
GTGCACCGTT TGAAGTCGTC GTCGCGCGCC GTGGGTGCGT TTGCGCTGGG GGAGGTCTGC
CATCGCATGG AAACGGCGGC CCGGCAAGGC AATGTGGCCG CACTCGGTGC GCTCGGCGAG
GAATTCGATG ACGCCTTTGC ACGGCTGAGT ATGGCGATTC GCAGTTGA
 
Protein sequence
MEMIQRPTPF FSILARARAP DPAHARRPQL ARSDGAMQFC ASMRENIIYA LIKFHLNHIN 
ARRSRSHTDA KRPLPMSTSE ETHVPARLGD DVTAPTQAAD HRDPLLELSL DLICEASGDG
YFTRVNPAFT SVLGWRADEL LARPFLDFVA PEDRARTQEL VRSHVKGNPI EDFQNRYLCK
DGAVRWLSWR AVLRDDGTLY ATARDVTQSR IAQLEIERAR QEAEAASRAK SAFLAMISHE
IRTPMNGVIG MIEVLTRTTL SADQREMVAT VRESAAALLN IIDDILDFSK IEADKMRIEC
VPLSIEHTVE TLCASLVLLA ERNNVALYLD IDPGLPAQVL GDDLRLRQVL YNLVGNAIKF
SGGALPGGRV YLRIAPAGGD VVRFEIEDNG IGMPPDAMAT LFQPFVQAET TTTRRFGGTG
LGLAICRRLT ELMGGSIAAA SQPGAGATFT VCLPLRAAEA PLPRPTPISG VHCLLIDIAE
PQRTTVARYL RHAGATVTAQ DDVPARIAAA ADGTGAGVLL HGDDASPAAI SALIAQMPTG
TGRVRLRAGY SPAPASEAGN AVSIGRHALR RRTLEDAVAM AAKRLLPAAA PLAEPEIAQA
STSASVQAHR LLVAEDDEIN RRVISRQLQL LGYRVDFAAD GADALDRWRR GSYALLLTDL
HMPRLDGYAL CDQIRAEEAQ AGRTRMPVIA LTANAIKGEA LQARDIGMDD YLAKPLTLSA
LQQTLAHWLP SPSPSLAGPM PTAGPHALPV FDAEALRAFV GDDAAAIREL LDEYERAAQT
IAASIRRDIA AQRADGVAHG VHRLKSSSRA VGAFALGEVC HRMETAARQG NVAALGALGE
EFDDAFARLS MAIRS