| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4954 |
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| Symbol | |
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| ID | 3613902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007348 |
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| Strand | + |
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| Start bp | 1681532 |
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| End bp | 1683553 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637694382 |
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| Product | Terpene synthase:squalene cyclase |
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| Protein accession | YP_299146 |
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| Protein GI | 73538779 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.58482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATGA ACGAGGCCGT CCTTGCCGCT CCGCGCGCCG CGGTCGCGAC CGCGGCGCCG
GCCCTACAGG CCCCCATTGA GGCCCTGTCC CCGCTGGATG CCGGCATCGG CCACGCGGTC
GATGCGCTGC TCGCGCAGCA GAATGCCGAC GGGCACTGGG TCTACGAGCT CGAAGCCGAC
GCCACCATTC CCGCCGAGTA CGTGCTCATG GTGCACTACC TCGGCGAGAC GCCGGACCTG
TCGCTGGAAG CCCGCATCGC GCGCTACCTG CGGCGCATCC AGAATGCCGA CGGCGGCTGG
CCGCTGTTCC ATGAAGGCCG CTCCGATATC AGCGCCAGCG TGAAGGCCTA CTTCGCGCTG
AAGATGGCCG GCGACGATCC GCAGGCAGCG CACATGGCGC GCGCGCGCGA GGTCATCCTC
GCGATGGGCG GCGCGGAAAC CAGCAACGTC TTCACGCGCA CGCTGCTGGC GCTGTACGGC
GTGATGCCGT GGCAGGCCGT GCCGATGATG CCGGTGGAAA TCATGCTGCT GCCGCAGTGG
TTCCCGTTCC ACCTGTCAAA GGTTTCCTAC TGGGCGCGCA CGGTCATCGT GCCGCTGCTG
GTGCTGAACA GCCTGCGGCC GCAGGCGCGC AATCCGCGCA AGGTCGGTAT CGACGAACTG
TTCCTCGGCT CGCGCGATGC CGTACGGCTG CCGCCACGGG CACCGCACCA GCATAAGGGC
TGGCACGCGC TGTTTCACGG CGCCGACGTA CTGCTGCGCA CGGCCGAACA CGTCATGCCG
CGCGGCCTGC GCCGCCGCGC CATCGACGCG GCGAAGGCGT TCGTGCGCGA ACGGCTCAAC
GGCGAAGACG GTCTTGGCGC GATCTTCCCC GCCATGGCGA ACTCGGTGAT GATGTTCGAC
GTGCTCGGCG TCCCGCCCGA CGATCCGGAC CGCGCCATCG CCCGCCGCTC GATCGACAAG
CTGCTCGTGG TCCACGGTGA TGAAGCCTAT TGCCAGCCGT GCCTGTCGCC GGTCTGGGAT
ACCGCGCTGG CTGCGCATGC GTTGCTGGAA GCGTCGGAGC CGCGCGCTAC CGCCGCCGTC
ACGCGCGCGC TGGACTGGCT GCGCCCGTTG CAGGTGCTCG ACGTGCGCGG CGACTGGACG
GTACGCCGGC CGGATGTGCG CCCGGGCGGC TGGGCGTTCC AGTACGCCAA TCCGCATTAC
CCCGACGTGG ACGACACCGC CGTGGTAGTC GCGGCGATGC ACCGCGCCGC GCGTACGGAT
CATTCCGGAC GCGCGGATCC GAACGCCGAA GCCACCGCCC GCGCGATTGA ATGGATCGTC
GGCATGCAGA GCGCCAACGG CGGCTGGGGT GCGTTCGAGC CCGAGAACAC GCATCTGTAC
CTGAACAACA TCCCGTTTGC GGACCATGGG GCCTTGCTCG ACCCGCCCAC GGCCGACGTG
TCGGCGCGCT GCCTGTCGAT GCTGTGCCAG ACCGGCGCCA CGCCCGACAA GAGCGAACCG
GCCGCGCGCG CGCTCCAATA TCTGCTCGCC GAGCAGTTAC CGGACGGAAG CTGGTTCGGG
CGCTGGGGTA CCAACTACAT CTACGGCACC TGGAGCGCTT TGTGCGCGCT CAACGCCGCG
GGTCTGGGAC CGGACGCGCC GCCGCTGCGG CGTGCTGCGG AATGGCTCGT GGCCATCCAG
AATCCGGATG GCGGCTGGGG CGAAGACGGC GACAGCTACA AGCTCGAATA TCGTGGCTAC
GAAACGGCAC CGAGCGTGGC CTCCCAAACC GCCTGGGCAT TGCTCGCGCT GATGGCTGCG
GGCCAGGCCG CACACCCCGC GGTGACGCGC GGCATCGACT ACCTGCTGCG CACGCAGCAA
GCCGACGGCC TCTGGCACGA GCCACGCTTC ACCGCCGTAG GATTCCCGCG CGTGTTCTAC
CTGCGCTATC ACGGCTATGC GCGTTACTTC CCGCTGTGGG CGCTGGCGCG CTATCGCAAC
CTGGAGCGCA GCGGCAACCG TCAGGTGGCG TGGGGACTGT GA
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| Protein sequence | MSMNEAVLAA PRAAVATAAP ALQAPIEALS PLDAGIGHAV DALLAQQNAD GHWVYELEAD
ATIPAEYVLM VHYLGETPDL SLEARIARYL RRIQNADGGW PLFHEGRSDI SASVKAYFAL
KMAGDDPQAA HMARAREVIL AMGGAETSNV FTRTLLALYG VMPWQAVPMM PVEIMLLPQW
FPFHLSKVSY WARTVIVPLL VLNSLRPQAR NPRKVGIDEL FLGSRDAVRL PPRAPHQHKG
WHALFHGADV LLRTAEHVMP RGLRRRAIDA AKAFVRERLN GEDGLGAIFP AMANSVMMFD
VLGVPPDDPD RAIARRSIDK LLVVHGDEAY CQPCLSPVWD TALAAHALLE ASEPRATAAV
TRALDWLRPL QVLDVRGDWT VRRPDVRPGG WAFQYANPHY PDVDDTAVVV AAMHRAARTD
HSGRADPNAE ATARAIEWIV GMQSANGGWG AFEPENTHLY LNNIPFADHG ALLDPPTADV
SARCLSMLCQ TGATPDKSEP AARALQYLLA EQLPDGSWFG RWGTNYIYGT WSALCALNAA
GLGPDAPPLR RAAEWLVAIQ NPDGGWGEDG DSYKLEYRGY ETAPSVASQT AWALLALMAA
GQAAHPAVTR GIDYLLRTQQ ADGLWHEPRF TAVGFPRVFY LRYHGYARYF PLWALARYRN
LERSGNRQVA WGL
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