| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4953 |
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| Symbol | |
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| ID | 3613901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007348 |
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| Strand | + |
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| Start bp | 1680526 |
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| End bp | 1681431 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637694381 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_299145 |
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| Protein GI | 73538778 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.251638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCACG ACGGCAAAAA AAGCGTGTCG AGGAGTTACG TGGCCGGTAC TCAAATCGCA
ACGCCAGACG CCCCCATCGC CGGTGCGGCC ACGCAGGCCG TATCCTCGGG CAGTTCATTT
CACGCGGCCA TGCGCATCCT GCCAGCAGCG CAGCGGCAGG CCATGTTCGA GATCTACGCG
TTCTGCCGCG CCGTTGACGA CATTGCAGAC TGCGACGCGC CGCATGCCGA GCGCCTGGCC
GGCCTGGACG CATGGCGACG TGACATCGGC CTGTGCTACG CGGGCATGGC CCCAAGCGCG
CTGCGGCCGC TGGCGCAACA GATCGAAGCC TTCCACCTGC GCCAGCAGGA TTTCCTCGAC
GTGATCGACG GCATGACCAT GGACGTGGTC GCCGATATCC GCGCGCCCGA TGCCGACACG
CTGGACCTGT ACTGCGACCG TGTCGCGAGC GCGGTGGGCC GTCTCGCCGT TCGTGTGTTC
GGCATGGATG AAGCGCCTGG CCTCGCGCTG GCCCATCATC TCGGGCGTGC GCTGCAGCTC
ACCAACATCC TGCGCGATAT CGACGAAGAC GCCGCCATCG GCCGCCTCTA CCTGCCTGCG
CCCGCGCTGG CCGCCGCGGG CGTACAAGGG CTGGAGCACG CCACGCCAAT GGAAGTCATC
GCGCATGCCG GTATCGACGC CGCGTGCGCG GCCGTCGCGC GTGAAGCGCA GGCGCACTAC
GAACAGGCCG ACGCGGTGAT GGCGCGCTGC CCGTCGCGCG TGGTGCGCTC CCCGCGCATC
ATGTCGCAGG TCTACCACTG CCTGCTCGTG CGCCTGCGTG CGCGGGGCTG GCGCGCGCCG
CGCGCACGCG TGCGTGTGCC GCGTGCGCAG TTGCTGTGGA TCGTCCTGCG GCACACCATG
GTTTGA
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| Protein sequence | MPHDGKKSVS RSYVAGTQIA TPDAPIAGAA TQAVSSGSSF HAAMRILPAA QRQAMFEIYA
FCRAVDDIAD CDAPHAERLA GLDAWRRDIG LCYAGMAPSA LRPLAQQIEA FHLRQQDFLD
VIDGMTMDVV ADIRAPDADT LDLYCDRVAS AVGRLAVRVF GMDEAPGLAL AHHLGRALQL
TNILRDIDED AAIGRLYLPA PALAAAGVQG LEHATPMEVI AHAGIDAACA AVAREAQAHY
EQADAVMARC PSRVVRSPRI MSQVYHCLLV RLRARGWRAP RARVRVPRAQ LLWIVLRHTM
V
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