Gene Reut_B4883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B4883 
Symbol 
ID3614433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp1602775 
End bp1606476 
Gene Length3702 bp 
Protein Length1233 aa 
Translation table11 
GC content69% 
IMG OID637694310 
Productallophanate hydrolase subunit 2 
Protein accessionYP_299075 
Protein GI73538708 
COG category[E] Amino acid transport and metabolism
[I] Lipid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2
[COG2049] Allophanate hydrolase subunit 1
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain
[TIGR02712] urea carboxylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.104085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCGA ATTCCGCTCC TGCATCCGGC GCCGGCACGC CCGCGCCGCG CTTTGATACC 
GTCCTGATCG CCAACCGCGG CGCCATTGCC TGCCGCATCA TCCGCACGCT GCGCGAACTG
GGCCTGCGCT CCGTCGCCGT GTATTCCGAA GCCGATGCCG AGTCCGCGCA CGTCGCCATG
GCGGACGAGG CGGTCTGCAT CGGTCCGGCG CCTGCCGCGC AGAGCTATCT CGATGCGGCA
AGATTGCTTG AGGCCGCGCG CGCTACCGGC GCAGGCGCCA TCCATCCGGG CTACGGCTTC
CTGTCCGAGA ACCCCGGCTT CGCGCAGGAC TGCGAAGCGG CCGGCGTCGC GTTCATCGGC
CCGACGCCAG ACCAGATGCG CGCGTTCGGC CTGAAGCACA CGGCCCGCGC ACTGGCGGAG
CAGCATGACG TACCGCTGCT ACCGGGCAGC GGTTTGCTCG ATGGCCTGGA CCACGCGCGT
ACGGAGGCCG CGCGCATCGG CTACCCGGTC ATGCTCAAGA GCAGCGCGGG CGGCGGCGGC
ATCGGCATGC GGCTGGTACG CAGCGAAGCG GAACTCGTGC CTGCGTTCGA AGCCGTGGAA
CGGCTCGCGC GCGCCAACTT CAAGGATGCT GGACTGTTCC TGGAAAAATT CGTCGAGCGC
GCACGCCATA TCGAAGTGCA GCTGTTTGGC GATGGCCATG GCAATGTGGT CGCGCTCGGC
GAACGGGACT GTTCCGCGCA GCGCCGCAAC CAGAAGGTGA TCGAGGAAAC GCCGGCACCG
GGGCTGGACA CCACTACGCG CGATGCGCTG ATGGCGGCGG CCGTGCGGCT TGGCCGCGCC
GTCAGCTACC GCTCGGCTGG CACGGTGGAA TTCGTGCTCG ATGCGGACAC GGGCGCGTTC
TATTTCCTTG AGGTCAACAC CCGGCTGCAG GTCGAGCATG GCGTGACCGA GCAGGTCACC
GGCGTCGACC TCGTCGCATG GATGGTGCGG CTCGCGCGCG GGGATGCGTT TGCGCTGGAG
GCCGCCACGC CGCGCGGCGC ATCGATCCAG GTCCGGCTCT ATGCCGAAGA CCCTGCGCGC
AATTTCCAGC CGAGTGCCGG CTTGCTCACC GAAGTGGTGT TTCCCGACGA TATCCGCGTC
GAAAGCTGGG TGACCGCGGG GACCGAAGTG CCGGCCCACT ACGACCCGAT GCTCGCTAAG
CTGATCGTGA CCGGTGTCGA CCGCGCGGAT GCCGTGCAGC GGCTCCAGCG CGCGTTGGCC
GCCTGTCGCG TCGGCGGCAT CGAAACCAAC CTGCGTTACC TGCGCGACGT CGCCGCGAGC
GAGGATTTCG TCAACGGCCG AATCGTCACG TGCTCGCTGG GCGAGCTGCA TTTCGTGCCG
GATGCGATGG AAGTACTCGA CGCCGGCGTG CAGACCACTG TGCAGGACTG GCCCGGCCGC
CTCGGCTACT GGGACGTGGG CGTGCCGCCT TCCGGTCCGA TGGACGACCA GTCGCTGCGG
CTGGCCAATC GCCTCGTTGG CAATGCCGCG CATGCTGCGG GCCTCGAATG CACGCTGGGC
GGCCCGACGC TTCGCTTCTG GCGCGAGGCC GTGATCGCGG TGTGCGGCGC GCCGTTGCCG
CTGATGCTCG ACGGCAAGCC GATCGCGCCG TGGATGGCGC ATCGCGTGCC GGCCGGCAGC
ACGCTGGCGA TCGGCGCGGC GCCCGCGCAT GGCAGCCGCG CGTACCTGGC CGTGCGTGGC
GGCTTCGACG TGCCGCATTA CCTCGGCAGC CGCTCCACGT TCACGCTGGG CCAGTTCGGC
GGCCACGGCG GACGCACGCT GCGCGTGGGC GACGTGCTCC ATATCGGCGC GGAAGTGGAA
GATGAACCGT CGGCGCTGGC GGCCGAAGCG GTGCCCGCCT TCCCGCAGGC AGGGCAGCCA
TGGGACATCG GCGTGCTGTA CGGCCCGCAT GGCGCACCGG ATTTCTTCAC GGACGCCGAT
ATCGATGCGT TCTTTGCCGC CGAGTGGGAG GTCCACTACA ACTCGAGCCG CACGGGCGTC
CGGCTGATCG GCCCCAAGCC ACAATGGGCG CGGCCCGATG GCGGCGAAGC CGGCCTGCAT
CCGTCCAATA TCCACGACAA CGCGTATGCC ATCGGTGCGA TCGATTTCAC CGGCGACATG
CCGGTGATCC TCGGTCCCGA CGGCCCCAGC CTCGGCGGTT TCGTGTGCCC GGCCGTGGTG
GCCGCGGCCG AGCGATGGAA GCTCGGCCAG CTGCGCCCGG GCACCAAAGT GCGATTCCGG
CGCATCGCGC AGTCGGAAGC CGCTGCCCTG CACGCAACGC AGGACGCGCT GGTGCGCACG
CTTGCACCAC AGTCCATGCC CGGGCTTGCA CCGGCATCGC CAGAATCACC CGTGGTGCTG
TCCCGGCCGG CAGTGTCGGG CCGTCCGGCG CTGGTCGTGC GGCAGGCGGG TGACCGCTAC
CTGCTTGTCG AGCTTGGCGA AGCGCAACTC GACATCGGCC TGCGCATGCG TATTCATGCA
TTGCATGCTG CCGTGCTGGC CCTTGACTTG CCGGGCATCA TCGACCTGAC GCCCGGCATC
CGCTCGCTGC AGATTCATTT CGACCCCGCG CGGATCGAAC GCGGCGCGCT GGTCGATGCC
ATCGTGCGAG TAGACGAAGC ACTCGGCGAC ACGGACGATC TCTCGGTGCC GTCGCGCACG
GTCTGGCTGC CGCTGTCGTG GGATGACAGC GCGACGCGGC TGGCCATCGA CAAGTACATG
CAGTCGGTGC GTCCCGATGC GCCGTGGTGC CCGAGCAATA TTGAGTTCAT CCGTCGCATC
AACGGACTCG ACAGCATCGA GGCCGTGAAG GACATCGTGT TCTCCGCGAG CTACCTCGTG
CTCGGTCTCG GCGATGTCTA TCTGGGCGCG CCGGTGGCGA CGCCGCTCGA TCCGCGCCAT
CGGCTCGTGA CGACCAAGTA CAACCCGGCG CGCACCTGGA CGCCGGAAAA TGCCGTGGGC
ATCGGTGGCG CGTACATGTG CGTGTATGGC ATGGAAGGGC CCGGCGGCTA CCAGTTCGTG
GGCCGCACGC TGCAGATGTG GAACCGCTGG CGCGATGCCG ATAGCGGCGC GCCGGCCTTC
GAAGCGGGCA AGCCGTGGCT GCTGCGCTGC TTCGACACGA TCCGCTTCTA CCCCGTCGGC
GAGGACGAGC TGCTGCAGAT CCGCAAGGAT TTCCCGGCGG GTCGCTATCC GGTGCGCATC
GAGACGGGCC GCTTTTCCAT GCGTGACCAT CAGCGACTGC TGGACGAGAA CGCCGCCGAT
ATCGCCGCGT TCCGCTTGCG CCAACAGTCG GCCTTTGCGG CTGAGCGCGA GCGGTGGCGC
GTGGCAGGGC AGGCCGAGCA TGTGGACGAG CCGGTCGCGG CTGCGTCCGC GACGGATGAT
GCGGGCGAGC GTCCCGAGGG GGCGCGCGTA GTCTGCAGCG CCGTGCCCGG CAGTGTCTGG
AAAGTGTTGG TGCAGCCCGG CAGCAGCGTC GAAGCGGGCG ACACGCTCGT CGTGGTCGAG
TCGATGAAGA TGGAGTTCGC CGTGGTGGCG CCTTGTGCGG GGACCGTGTG GCATCTCGGC
TGCGCCGAAG GGGCGCCGGT CGGCGCGGGA CAGGAGATGG CTGTGGTCGT ACCGGACGTC
GTGCAGGTTT GCGCCGATAT GGCAAGCGAG GTGGCAGCAT GA
 
Protein sequence
MSANSAPASG AGTPAPRFDT VLIANRGAIA CRIIRTLREL GLRSVAVYSE ADAESAHVAM 
ADEAVCIGPA PAAQSYLDAA RLLEAARATG AGAIHPGYGF LSENPGFAQD CEAAGVAFIG
PTPDQMRAFG LKHTARALAE QHDVPLLPGS GLLDGLDHAR TEAARIGYPV MLKSSAGGGG
IGMRLVRSEA ELVPAFEAVE RLARANFKDA GLFLEKFVER ARHIEVQLFG DGHGNVVALG
ERDCSAQRRN QKVIEETPAP GLDTTTRDAL MAAAVRLGRA VSYRSAGTVE FVLDADTGAF
YFLEVNTRLQ VEHGVTEQVT GVDLVAWMVR LARGDAFALE AATPRGASIQ VRLYAEDPAR
NFQPSAGLLT EVVFPDDIRV ESWVTAGTEV PAHYDPMLAK LIVTGVDRAD AVQRLQRALA
ACRVGGIETN LRYLRDVAAS EDFVNGRIVT CSLGELHFVP DAMEVLDAGV QTTVQDWPGR
LGYWDVGVPP SGPMDDQSLR LANRLVGNAA HAAGLECTLG GPTLRFWREA VIAVCGAPLP
LMLDGKPIAP WMAHRVPAGS TLAIGAAPAH GSRAYLAVRG GFDVPHYLGS RSTFTLGQFG
GHGGRTLRVG DVLHIGAEVE DEPSALAAEA VPAFPQAGQP WDIGVLYGPH GAPDFFTDAD
IDAFFAAEWE VHYNSSRTGV RLIGPKPQWA RPDGGEAGLH PSNIHDNAYA IGAIDFTGDM
PVILGPDGPS LGGFVCPAVV AAAERWKLGQ LRPGTKVRFR RIAQSEAAAL HATQDALVRT
LAPQSMPGLA PASPESPVVL SRPAVSGRPA LVVRQAGDRY LLVELGEAQL DIGLRMRIHA
LHAAVLALDL PGIIDLTPGI RSLQIHFDPA RIERGALVDA IVRVDEALGD TDDLSVPSRT
VWLPLSWDDS ATRLAIDKYM QSVRPDAPWC PSNIEFIRRI NGLDSIEAVK DIVFSASYLV
LGLGDVYLGA PVATPLDPRH RLVTTKYNPA RTWTPENAVG IGGAYMCVYG MEGPGGYQFV
GRTLQMWNRW RDADSGAPAF EAGKPWLLRC FDTIRFYPVG EDELLQIRKD FPAGRYPVRI
ETGRFSMRDH QRLLDENAAD IAAFRLRQQS AFAAERERWR VAGQAEHVDE PVAAASATDD
AGERPEGARV VCSAVPGSVW KVLVQPGSSV EAGDTLVVVE SMKMEFAVVA PCAGTVWHLG
CAEGAPVGAG QEMAVVVPDV VQVCADMASE VAA