Gene Reut_B4872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B4872 
Symbol 
ID3614422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp1587966 
End bp1589180 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content67% 
IMG OID637694299 
Productputative 3-hydroxyphenylpropionic transporter MhpT 
Protein accessionYP_299064 
Protein GI73538697 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.216187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACTT CAACCGTAGT ACGCGCCGAG GCAACCTCGG GCGCGGCGCT GACGCTCGGT 
CTCTGCTTTG TCGTCGCGCT GCTGGAAGGG CTCGATTTGC AGTCGATCGG TGTCGCCGCG
CCCCGCATGG CGCGGGAGTT CGGCCTGTCG GTCAGCGAGA TGGGACTGGC GTTCAGCGCC
GGGACGTTCG GCCTGCTGCC CGGCGCCATG CTGGGCGGAC GGCTGGCCGA CCGCATCGGA
CGCAAGCGTG TGCTGATCGT AGCCACCGCG CTGTTCGGCA TCTTTTCCAT CGCGACGGCG
CACACCGTCG ACTTCTGGAG CCTGCTGGCC ATCCGTGTCG CCACCGGCAT GGGTCTGGGC
GGCGCCATGC CGAACCTGAT TGCGATCTGC TCGGAATCGG TGCCGGCCAG GCTGCGCAAT
ACCGCCGTCA GCATCATGTA CTGCGGCATC CCGTTCGGCG GCGCCGTGGC GGCGGTGATT
GGCATTCTCT CCGCCGGAGA CACCGGATGG CGCCACATTT TCTATGTCGG CGGCTTTGGG
CCGCTGCTCG TCGTGCCGCT GCTGCTGATG CTGCAGGACT CGCGTCGTTT CGATCCGCCG
CACGGTGAGT CGGTGAAGCC GCCGCCGGTG GCGTGGGCGC TCTTCGGGGA GCGCCGCGCG
ATGGCCACCG CATGCATCTG GATCAGCTAC TTCTTCACCC TGATCGTGCT GTATTTCCTG
CTGAACTGGC TGCCGTCGCT GATGGTGGCG AACGGCCTGA GCCGGCCACA GGCGGGTGTA
GTGCAGATCG TGTTCAACAT CGGCGGTGGC GTCGGAGCGC TAGGCATCGG GATGCTGATG
GATAAGGGTC GCCCGCGTGC GGTGGTGTCG GGCATGTATG CGGGGATTAT CGTCGCGCTC
GCCACGCTGG CGGCCGCTTC GGGCATGACC TGGATGGCAC TCGGCGCCTT CCTGGCAGGC
CTGTTCGTCA TCGGTGCGCA GTCGGTGCTC TATGCGCTGG CAGCCGCGTA TTACCCGATG
GCGGTGCGCG GCACCGGCGT GGGCACCGCA GTCGCGGTGG GGCGGCTCGG GTCCATCGCG
GGACCCATGC TGGCGGGGCA ACTGCTGGCC ATGGGCAAGA ACGCGAGCAC GATCATCGGC
GCAAGTATTC CGATCACCAT CATCTCGGCC GTTGCCGCAT TGCTGCTGTT GCAGCGGCCC
GCGGCTAAAG ACTGA
 
Protein sequence
MQTSTVVRAE ATSGAALTLG LCFVVALLEG LDLQSIGVAA PRMAREFGLS VSEMGLAFSA 
GTFGLLPGAM LGGRLADRIG RKRVLIVATA LFGIFSIATA HTVDFWSLLA IRVATGMGLG
GAMPNLIAIC SESVPARLRN TAVSIMYCGI PFGGAVAAVI GILSAGDTGW RHIFYVGGFG
PLLVVPLLLM LQDSRRFDPP HGESVKPPPV AWALFGERRA MATACIWISY FFTLIVLYFL
LNWLPSLMVA NGLSRPQAGV VQIVFNIGGG VGALGIGMLM DKGRPRAVVS GMYAGIIVAL
ATLAAASGMT WMALGAFLAG LFVIGAQSVL YALAAAYYPM AVRGTGVGTA VAVGRLGSIA
GPMLAGQLLA MGKNASTIIG ASIPITIISA VAALLLLQRP AAKD