| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4859 |
|---|
| Symbol | |
|---|
| ID | 3613472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 1567467 |
|---|
| End bp | 1568786 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637694286 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_299051 |
|---|
| Protein GI | 73538684 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGCA AAGCCACCCG CATCCAGTTG TTGAGTCTGC GAAGCCCGCA GATGCGTGCC
TTCCACCTGA CGTGGATGGC GTTCTTCGTG TGTTTCTTTG CATGGTTCGC GTGCGCGCCG
CTGATGCCGG TGATCAAGGG CGAATTCGGC CTCACGCCGG CGCAGATCGC CAATATCAAT
ATCGCCGCGG TGGCAGTGAC CATTCTCGTG CGGCTGGTGA TCGGCCCGAT GTGCGACCGC
TTCGGCCCGC GCAAGACCTA CACCGGCTTG CTGGTGCTGG GCGCGCTGCC CGTGATCGGC
GTGGCGTTCG CGCAGAGCTA CGAAACGTTC CTCGCGTTTC GCCTGCTGAT TGGCGCCGTC
GGTGCGAGCT TCGTCATCAC GCAGTACCAC ACCTCGGTCA TGTTCGCGCC CAACGTCGTT
GGCACCGCCA ACGCGGCAGC GGCAGGCTGG GGCAATGCCG GCGGCGGCGC CGCGCAGGCG
CTGATGCCGC TGCTGCTGGG CGCGGTGCTG ATGCTTGGCG TGGACCATGC AATGGGCTGG
CGCGTGGCGC TGCTGGTGCC GGGCGTGCTG ATGCTGGTCA TGGCCGTCGT CTACTGGTGC
TTCACGCAGG ACTGCCCCGA AGGCAATTAC TCCGACATGC GCGCCCGCGG CCAGGCCATC
ACTGGCAAGG ATGGCGGCAA GGGCGGCGGC TGGGCCAGCT TCCGCGCCGC CAGCGCCAAC
TATCGCGTGT GGCTGCTGTT CGTCACCTAC GGTGCGTGCT TCGGCGTGGA GATCTTCATC
CACAACATCG CCGCCACGTT CTACGTGGAC CACTTCGGCC TGAGCCTGAA GGCCGCGGGC
CTGGCCGCTG GCAGCTTCGG CCTGCTGGCG CTGTTCGCCC GTGCCCTCGG CGGCTGGCTG
TCAGACAAGG CGGCGCGCCG CCGCGGCCTC GATGCACGCT CGACGCTGCT GTTCGTGCTG
ATCCTCGGCG AAGGCCTGGG CCTGCTCTGG TTCGCGCAGG CCGGCAACGT CGTGATGGCC
GTGACTGCCA TGCTGCTGTT CGGCCTGTTC ACGCACATGG CCTGCGGCGC TACGTATGCG
CTGGTTCCCT TTATCGACCG CAAGGCGCTC GGCGGCGTGG CCGGCATCAT CGGCGCCGGC
GGCAACGTGG GTGCGGTGGC CGCCGGCTTC CTGCTCAAGG GCCTGGGCGA CCTGCAGCAA
ACGCTCACCG TGCTTGGAGT GCTCGCGGCC CTGGCCGCGT TGTGCGCGAT CGCCATCCGC
TTCAGCGCCG AGCACAAGGC GCAGGAACAG GCGCTGTACG ACAGCGCGCT GGCCAACTGA
|
|---|
| Protein sequence | MNGKATRIQL LSLRSPQMRA FHLTWMAFFV CFFAWFACAP LMPVIKGEFG LTPAQIANIN
IAAVAVTILV RLVIGPMCDR FGPRKTYTGL LVLGALPVIG VAFAQSYETF LAFRLLIGAV
GASFVITQYH TSVMFAPNVV GTANAAAAGW GNAGGGAAQA LMPLLLGAVL MLGVDHAMGW
RVALLVPGVL MLVMAVVYWC FTQDCPEGNY SDMRARGQAI TGKDGGKGGG WASFRAASAN
YRVWLLFVTY GACFGVEIFI HNIAATFYVD HFGLSLKAAG LAAGSFGLLA LFARALGGWL
SDKAARRRGL DARSTLLFVL ILGEGLGLLW FAQAGNVVMA VTAMLLFGLF THMACGATYA
LVPFIDRKAL GGVAGIIGAG GNVGAVAAGF LLKGLGDLQQ TLTVLGVLAA LAALCAIAIR
FSAEHKAQEQ ALYDSALAN
|
|---|
| |