Gene Reut_B4842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B4842 
Symbol 
ID3612785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp1549956 
End bp1550498 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content66% 
IMG OID637694269 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_299034 
Protein GI73538667 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACA CGCTCATGCC CGCCACAGGG CACTTCACCG GTCGCGCCTG GGTGTTCGGC 
GACGATATCA ATACCGACCT GCTGGCGCCC GGCGCGTATA TGAAGTACGG CATCGATGCG
CTCGCGCGCC ATTGCATGGA GCATGTCGAT CCCGGGTTTG CCGCCGCGGT GCGGCCCGGA
GACATCGTGT TCGGCGGGCG CAATTTCGGC GCGGGCTCGT CGCGCGAACA GGCGGTGGAG
GTCTTGCGGC ATCTGGGCGT GGCAGCCGTA GTCGCGCCGT CGTTCGCCGG GCTGTTCTAT
CGCAACGGCT TCAACCTGGG CCTCCCGCTG TTCACTTGCC CGTCGCTGCC GCGTATTGCG
GCGGGCCAGC GCGCCGGTTG CGATCTTGCG CGTGCGCAGG TCTTTGTCGA AGGCCTCGCG
CCACTACAAT GCGAACCGGT TCCGCCGCAC CTGGTGGACA TGATCCAAGA CGGCGGCCTG
GTGCCGCACC TCGCCCGCAA GATCGCGGCG GGCCAACTTT CCGTGAACGG AAATCCAGCA
TGA
 
Protein sequence
MNDTLMPATG HFTGRAWVFG DDINTDLLAP GAYMKYGIDA LARHCMEHVD PGFAAAVRPG 
DIVFGGRNFG AGSSREQAVE VLRHLGVAAV VAPSFAGLFY RNGFNLGLPL FTCPSLPRIA
AGQRAGCDLA RAQVFVEGLA PLQCEPVPPH LVDMIQDGGL VPHLARKIAA GQLSVNGNPA