Gene Reut_B4770 details

Gene Information

• Locus tag: Reut_B4770
• ID: 3613326
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia eutropha JMP134
• Kingdom: Bacteria
• Replicon accession: NC_007348
• Strand: +
• Start bp: 1469700
• End bp: 1471721
• Gene Length: 2022 bp
• Protein Length: 673 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637694197
• Product: cytochrome c-type biogenesis protein CcmF
• Protein accession: YP_298962
• Protein GI: 73538595
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1138] Cytochrome c biogenesis factor
• TIGRFAM ID: [TIGR00353] c-type cytochrome biogenesis protein CcmF

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCCGG AACTCGGACA CTTTGCATTG ATCGTGGCGC TGTTGGCCGC CATGATGCAG 
GCTCTGCTGC CGCTGGCCGG CGCGGCGCGT GCCAATGCGG CGTGGATGTC TGTCGCCAGG 
CCTGCAGCGC GCGTGCAGTG CGCGTTGATA GTGCTGGCCT ACGTGACACT GACGCTGGCC 
TTCGCGGGCA ATGACTTCAG CGTGCGCTAC GTCGCCGCAA ATTCGAACAG CGACCTGCCG 
CTCGCCTACC GGCTGGCCGC CGTCTGGGGG GGACATGAGG GCTCGATGCT GCTGTGGACG 
CTGATGCTGG CGCTGTGGTC CCTCGCGGTC TCGGTGTTCA GCCGCCGCCT CCCGCTGCCC 
GTGGTCGCAC GCGTGCTCGG CGTGATGGGC GCCATCAGCA GTGGCTTGCT GCTGTTCCTG 
CTGTTCGCGT CCAATCCGTT CATCCGCCTG CTGCCGCCGG CAATGGCCGG TCGGGACCTT 
AACCCGCTGC TGCAGGACCC CGGCATGGTG TTCCATCCGC CCATGCTTTA CATGGGATAC 
GTCGGCTTTG CCGTGACCTT TTCCTTTGCC GTCGCGGCGC TGCTCGAAGG GCGCCTCGAC 
GCCGCGTGGG CACGCTGGGC GCGGCCGTGG ACCACGGTGG CCTGGATGTT CCTGACGCTC 
GGCATCATGC TTGGCAGCGC ATGGGCCTAC TACGAGCTGG GCTGGGGCGG CTGGTGGTTC 
TGGGATCCGG TCGAGAATGC ATCGTTCATG CCGTGGCTCG CCGGCACGGC GCTGATGCAT 
TCGCTCGCGG TGACGGAGAA ACGCGGCGCG TTCCGCGCCT GGACCGCGCT GCTCGCGATC 
TTCACGTTCT CGCTGAGCTT GCTCGGCACC TTCCTGGTCC GCTCGGGTGT GCTGACCTCG 
GTCCACGCGT TCGCCGTCGA CCCGAAGCGC GGCATCTTCA TCCTCGCGCT GCTGGGTCTT 
GTGACCGGCC TGGCGCTCGC GCTGTTTGCA TGGCGCGCGC CGCGACTCGC TCGGCGCACG 
GCGTTCAGCC TGCTGTCGCG GGAAACTTTC CTGCTCGCCA ACAATGTGCT GCTGGCCATC 
GCGGCGGCGA CGGTGCTGCT GGGCACGCTC TACCCACTGC TGGTCGATGT GCTCGGCCTC 
GGCAAGATCT CGGTGGGCCC GGCCTACTTC GAGCAGGTCT TCGTGCCGCT GATGGCGCCC 
GCCGTGCTGC TGATGGGCGC CGCGCCGCTC GCGCGCTGGC GGCAGGGCGA CTTGCCGGAC 
ATGGCGCGCC GGCTGCGCTG GGCAGCCGCG GCCAGCATCG CCATTGGTGT CGGCCTGCTG 
CTGATCCTGC GCAATGCATC GGCACTGACC GGACTTGGCT TGCTGCTCGC GGCCTGGTGC 
GCTGCGAGCG CGGCCGCCAG CGTGGCCGCA AGGCTGCGCA ACCAGCGCGG ACGCCGGCTG 
GCCGCGCTGC GGCAACTGCC GGCCGGCTAT TTCGGCATGC TGCTGGCTCA CCTTGGCGTG 
GGCGTGTTCA TCGCGGGCGT GACGCTCGTG AGCAGCCAGG AAAGCCTGCG TGAGCTGCCG 
ATGCAGCCCG GCGAGACCGT CGCCGTCGGC GATCATGACT TCCGCTTCGG CGGCGTCAGT 
CCCGCCACGG GCCCGAACTA CGAAGCGCTG CGCGGCATCA TCAGCGTGTC GCGCCACGGC 
AAGACGATCA CCACGCTGAT GCCCGAACGC CGCATCTACC GCAGCCAGGA CATGCCGACC 
ACCGAGGCCG CCATCGACAG CGGCTTCACA CGCGATCTCT ACGTGGCGCT CGGCGAATCG 
CTCGGCGAAG GCCGCTGGGC CGTGCGCATC CACGTCAAGC CGTTCGTCGA CTGGATCTGG 
GGCGGGTGCG TGCTGATGGC GATCGGCGGG CTGCTCGCGG CCTGTGACCG GCGCTACCGG 
CTGCACCGGC AGGCTGCCAG CGCTGTGGCA CCGGAAGCGA ATGTCCCCCA GCCTCAGGCG 
CCCGCACTGG CGCTCGCTGG CAGCGAGGAG ACGCAGGCAT GA 

 

Protein sequence

MIPELGHFAL IVALLAAMMQ ALLPLAGAAR ANAAWMSVAR PAARVQCALI VLAYVTLTLA 
FAGNDFSVRY VAANSNSDLP LAYRLAAVWG GHEGSMLLWT LMLALWSLAV SVFSRRLPLP 
VVARVLGVMG AISSGLLLFL LFASNPFIRL LPPAMAGRDL NPLLQDPGMV FHPPMLYMGY 
VGFAVTFSFA VAALLEGRLD AAWARWARPW TTVAWMFLTL GIMLGSAWAY YELGWGGWWF 
WDPVENASFM PWLAGTALMH SLAVTEKRGA FRAWTALLAI FTFSLSLLGT FLVRSGVLTS 
VHAFAVDPKR GIFILALLGL VTGLALALFA WRAPRLARRT AFSLLSRETF LLANNVLLAI 
AAATVLLGTL YPLLVDVLGL GKISVGPAYF EQVFVPLMAP AVLLMGAAPL ARWRQGDLPD 
MARRLRWAAA ASIAIGVGLL LILRNASALT GLGLLLAAWC AASAAASVAA RLRNQRGRRL 
AALRQLPAGY FGMLLAHLGV GVFIAGVTLV SSQESLRELP MQPGETVAVG DHDFRFGGVS 
PATGPNYEAL RGIISVSRHG KTITTLMPER RIYRSQDMPT TEAAIDSGFT RDLYVALGES 
LGEGRWAVRI HVKPFVDWIW GGCVLMAIGG LLAACDRRYR LHRQAASAVA PEANVPQPQA 
PALALAGSEE TQA