| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4580 |
|---|
| Symbol | |
|---|
| ID | 3613679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 1260188 |
|---|
| End bp | 1261558 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637694009 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_298774 |
|---|
| Protein GI | 73538407 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGACCT GGGCGCGCGG GTTTTCGGCC GGCGCCGGCC CGCGCTACCT GCAGATCGTC
GGCTTCCTCG AGCAGGCGCT GGCCGACGGC CTGCTGCTGC CCGGCGACCG GCTGCCGCCG
CAGCGCGAAC TGGCCGCCCG CCTTGGGGTG GACCTGACCA CCGTCACCCG TGCGTTGAAC
GAGGCGCGGC GGCGCCGGCT GGTGGAATCG CGTGGAACGC TTGGCACTTT CGTCGCGGCA
CAGACCGCCG AACTGGCCCA GGTCGTCGAT CTCAGCATGA ACGTGCCGCC TCCGCCGGAA
GGTGTCGATT TCAACGACGT GATGCGCCGT GGCCTGACGC AGGTCACGCT GCGCACCGAT
GCCAGCCTGC TGATGACGTA CCAGCTTGGC GGCGGCAGCG CGTCCGAGCG TGCCGCGGGC
GCGCAATGGC TGGCGCCGAT GCTGGGCGCG GTCGAGCCTT CGCGTGTGGT GGTGTATCCG
GGTGCGCAGA GCGCGCTGGC GGCGCTGGTC CTGGCGCACA GCGCACCGGG CGACGCCATC
GCCGCCGAGC CGCTGATCTA CCCGGGCATG CGCCTCGCGG CCGCCACGCT GGGCCGCCGC
ATCGTGACGA TCGGCGTCGA TGCCGACGGC ATGCGCCCCG ACCTGCTTGA GGCCGCATGC
CGCAACGAAG GCGTGCGGCT GGTGTATCTG AATCCGACCT CGCAGAACCC CACCACGCAC
ACCATGCCCG AAGCGCGCCG GCTGGAACTG GCGCGCATTG CCGCCGCCTG GGATGCGCTG
ATCATCGAAG ACGATCCCTA CTGGCTGCTC ACGCCCGATG CGCCCCCGCC CATCGCGGCA
CTGGCACCGG AACGCGTTGC CTACGTATCG ACACTATCGA AGTGCCTGAG CCCGGGCCTG
CGCACCGCTT ACGTCGTGAT GCCCGGTGGA CCGGAGACGC AGGAAGCCAT GCTGTCCGCG
CTGCGCGCCT TCAGCCTGAT GGCGGCGCCG TTATCGATGG CGCTCGCGAT GCAGTGGATA
CAGGACGGCT CGGCCACCGA ACTGCTGGCC GGCATTCGCG CGGAAGCGGC CGCGCGTCAG
GCCATCGCGC GCCAGTGGCT GCCTGGCTCC GGGGCGCTGT CACCGGCCGG CATCCACCTT
TGGCATGCAC TGCCGAGCTA CTGGAGCGCT GCGCGGTTCA GCCGTGCCGC GCTCGATGAA
CAACTGCGCG TCACGCCCTC TGACGCATTC CATGAAGGGC CGACGCCGCC CAACATGATC
CGCATCTCGC TCGGCGGCGC GGCGCAGCGT ACGCAGCTGT CGATGGCACT GAAGCGGCTC
GCGGACCTGC TGGCACGCAA GCCGCTCGAT CAGGCAGCGG CCGTGGTTTG A
|
|---|
| Protein sequence | MLTWARGFSA GAGPRYLQIV GFLEQALADG LLLPGDRLPP QRELAARLGV DLTTVTRALN
EARRRRLVES RGTLGTFVAA QTAELAQVVD LSMNVPPPPE GVDFNDVMRR GLTQVTLRTD
ASLLMTYQLG GGSASERAAG AQWLAPMLGA VEPSRVVVYP GAQSALAALV LAHSAPGDAI
AAEPLIYPGM RLAAATLGRR IVTIGVDADG MRPDLLEAAC RNEGVRLVYL NPTSQNPTTH
TMPEARRLEL ARIAAAWDAL IIEDDPYWLL TPDAPPPIAA LAPERVAYVS TLSKCLSPGL
RTAYVVMPGG PETQEAMLSA LRAFSLMAAP LSMALAMQWI QDGSATELLA GIRAEAAARQ
AIARQWLPGS GALSPAGIHL WHALPSYWSA ARFSRAALDE QLRVTPSDAF HEGPTPPNMI
RISLGGAAQR TQLSMALKRL ADLLARKPLD QAAAVV
|
|---|
| |