| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4530 |
|---|
| Symbol | |
|---|
| ID | 3612529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 1202276 |
|---|
| End bp | 1203742 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637693959 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_298724 |
|---|
| Protein GI | 73538357 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.328148 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACATC GATCCGCATT CCAGCCAGCG TGGCCTGGCG ATCTGGCGCC GCCCCTGGAC
CCGGCACGCC TTGCCGAACC CCATATCCTC CAGCCCGAAT GGACGCTGTT GCGCCACGGT
GCCGTGCGCG ATCACGCGGT GGTGGTCGAG GGCGGCCGCT TCACGGCGGT AGGCCCGGTC
GACGACGTTG CCGCGCAGTT TCCGTCGCTG AAGCGGCTTT CCCTGCCAGG CATGCTGCTG
ATGCCCGGCA TGATCGACAC CCATCACCAC CTGACCCAGT CGTTCGGCAA GTCGCTGGTG
TTCGGCGAGC CCTCAGAGAT TTTCCGTCGC GTATGGGTCC CGCTGGAAGG CAGTCTCAAC
GCCGAGCATC TCTACCTGTC GTCAAAACTC GCGGCGCTGG AGGCGCTGCG CGGCGGCTTC
ACGACCGTCG TGGATGCGGG CACGCGCAGC GACGCGGGGC TCGACGCCAT TGCGCGGGCC
GTGTCCGATG CCGGCGTGCG GTGCGTGCTG GGGCTGATCT GCAACGACCG CCCGGGCGCC
GAGACGCTCG ATGCCGCTCC CATCCAGCGC CGCGCATCCG AGCATCTTGG CCGCTACGAT
CACCACGCAC TGGTCACGCC ATCGCTGGCG ATCTCGATTC CCGAAGTCGC CAGCGATGCG
ATGCTGCATT ACGTACATCG CATGTGTGCC GAAGCGGGTC GAATTTTCCA GACGCATGCC
AACGAGCACC TGGTCGCGGT GGAGCGTTCG CTCAACGCCT GCGGCCGCCG GCCGATCGAA
CATCTGGCAG CCGTAGGAGC GCTTGGCCCC GCGGCGCTGC TGGCGCATGC CACGCTGGTC
ACGCCGCATG AGATCCGCCT GCTGGCCGAC ACTGGCGCGG CCGTTGCCTA CAACCCGGTG
GCCAGTGCAT GGAAGGGCAA TGCCGTGGCA CCGGCTGAAA CCATGGCCAC CTTCGGCGTT
CGGCTCGGAT TGGGCACCGA CGGTACGCGC AGCGACGGCT TCCGTCTGCT CGACTATGCC
GAAGCGGCGC AGCGTTTTGC GTTCGGCATC GGCGTGGGCG ACTCATCGTG CGGGGCCGGC
TGGCGCTGGC TCGACATGGC GACGCATGAT GCTGCCGACG TGGCCGGTCT TGGTGCGGTG
ACCGGCGAGA TTGCCGCGGG CAAGCGTGCG GATTTCCTGC TGGTCGATCT CGACGTGCCG
GAGCTGACGC CTTCTTGGGA CGTGACGTGG GAGCTCGTGC GTCTTGCCAA TCGCGACCAG
ATCCGCGCTG TGTTTGTCGA TGGCAAGTTA CGGCTGTGGG AAGGATGGCC GCCGGACTGG
GATGCACGTG CGCTGATGCG TGATATCCGC GCGATGGCCG CCGACACGAT TGCCGGCGCG
CCGATCCGCA AACTGCACGA CTACGCCGAT GCACATCGCG CGCGGCACGC GCAAACGGTG
CCGCACGCCG GCACGCCTGG AGCATGA
|
|---|
| Protein sequence | MTHRSAFQPA WPGDLAPPLD PARLAEPHIL QPEWTLLRHG AVRDHAVVVE GGRFTAVGPV
DDVAAQFPSL KRLSLPGMLL MPGMIDTHHH LTQSFGKSLV FGEPSEIFRR VWVPLEGSLN
AEHLYLSSKL AALEALRGGF TTVVDAGTRS DAGLDAIARA VSDAGVRCVL GLICNDRPGA
ETLDAAPIQR RASEHLGRYD HHALVTPSLA ISIPEVASDA MLHYVHRMCA EAGRIFQTHA
NEHLVAVERS LNACGRRPIE HLAAVGALGP AALLAHATLV TPHEIRLLAD TGAAVAYNPV
ASAWKGNAVA PAETMATFGV RLGLGTDGTR SDGFRLLDYA EAAQRFAFGI GVGDSSCGAG
WRWLDMATHD AADVAGLGAV TGEIAAGKRA DFLLVDLDVP ELTPSWDVTW ELVRLANRDQ
IRAVFVDGKL RLWEGWPPDW DARALMRDIR AMAADTIAGA PIRKLHDYAD AHRARHAQTV
PHAGTPGA
|
|---|
| |