| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4428 |
|---|
| Symbol | |
|---|
| ID | 3614290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 1087252 |
|---|
| End bp | 1090104 |
|---|
| Gene Length | 2853 bp |
|---|
| Protein Length | 950 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637693858 |
|---|
| Product | 4Fe-4S ferredoxin, iron-sulfur binding |
|---|
| Protein accession | YP_298623 |
|---|
| Protein GI | 73538256 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGGG CGCGCGTGAT CCCCCTCGTG CCGGTCGATG AGCCATCGGA TGCGCCCCGC
AGCCCTGCCC GCCGCCATTT CCTGCGTACG ACCATGGCGG CTTCGGCAGC GCTCGCGGGC
GCCGCATGCA GCGGGCCGCC AGCCGAGATG ATCGTCCCCT ACGTGCAGAT GCCAGAAGGC
ATCGTCCCAG GCCGGCCGCT GTTCTACGCC ACGGCACTGA CGCGCCACGG CTACGGGATG
GGTGTTCTCG TCGAAACCAA TATGGGCCGC CCGACCAAGA TCGAGGGCAA CCCGCGTCAC
CCCGCCAGCC TCGGTGCGAC GCATCCGTTC GATCAGGCCG CCGTACTTCA GCTCTGGGAC
CCCGACCGCA GCCAGGCGCC GTATCGCGGC GGTGCGCTGT CGGGCTGGGC AGCGTTCGAC
GCGGCGCTGG CCACGCAGCG GGTCCAGTGG CGCGACCGTG ACGGCGAAGG CCTGCGGCTG
CTGACCGGCA ACGTAGGCTC GCCGACGCTG TCCGCCCAGA TTGCGCAATG GCTCGATCGC
TATCCGAAGG CCGTGTGGCA CGTGCACGAC CCGCTCTACG ACGAGGATCC CTCGCCGCGC
ATGGCGTTCG GCGACGACGT GGACCTGTTG ATCGACCCTA AGCCGGCCAC GACGATCGTG
ACGCTCGATG CCGATCTGGT CGGTCATGGT CCGGCTGCCG TGCGCCACGC GCACGACTTC
ATGGCGGACC GCCGCGGCGT GGCGCCAATG CTGGCGTGCC GGCTCTACGC GATCGAATCG
TCGCCGACGC TGACAGGCGA GATCTCCGAC AACCGGCTCG CGCTGCCACC TCACGAGATC
GAACGCCTCG CGTGGTCGCT CGCGCGCAAG CTCGGCGTGC CTGACGTTCC CGTCGACACG
CCCGAGCCTG CGTCCGACAC CGCAAGACAC TGGATCGCCG TGCTCGCCCG GCGACTGCGC
GAGGCACCGC CAGGCAGTTC GCTGTTGATC GCTGGCGGTG CCCTGTCCGG TCCGACAAGA
GCACTGGTCT GGCGGCTCAA TGCCCGGCTG GGCAATCTCG GCAAATCGGT GCGCCCGGTC
GCGGGCACCC CCAGGCGTCC GCTGGGCGAA GCGCATTCGA TTGGCGCACT GACCGAGGCC
ATGCGGGCCG GCGCAGTCTC GGCGCTGCTC ATGATCGATG TGAATCCCGC CTACGACGCG
CCGTGCGGTC TCGGCTTCGA TGCCGCGCTC CGGCATGTAC CATGGTCATC GCATATGGGC
GTGTATCGCG ACGAAACGGC GCGCCTGACG ACCTGGCATG CGCCCATGGC CCATGACCTG
GAGCGATGGA GCGACGCGCG TGCGTGGGAC GGCACGGCAT CCATCGTGCA ACCGGTGATC
GCACCGCTCA ACGGTGGCCG TTCGGCGCAT GAGCTTCTGT CCGCCGCTGT CGATGAACAC
CAGTCAGGCT ATGACCTCGT GCGCGCGCAC TGGCGTGCCC GCCAGCGCGA CGACTTCGAT
GCCTTCTGGG AACAGGCCTT GCGAACCGGC GTGATTGCGG ATACCGCCGC GCCGCCAGCC
ACGACCGACA TGCGCCAGCC CATCACGCCA CCGTCATTCG CGGCGCCCCC ATTGGTTGCC
CGGTTCATGC CCGACCCCGC CACCGATGCC GGAGAACTGG CCAACAATGC GTGGCTGCAG
GAACTGCCGC GCGCGCTGAC GCGGCACACC TGGGACAATG CCGCGCTGAT CGGGCCGCTG
ACGGCGCGCG CGCGACGTCT GTCTACCGGC GATATTGTCG TGATCCGGCG CACGGACCGG
CAGGGCAACC CGATCGAGGC GCCCGTGTGG GTGCTGCCCC GCCATGCCGA GGGCGTCGTG
TCGCTGCCGC TCGGCTACGG CCGCCGCCAT GCGGGGCGCG TCGGCAACGG CGTGGGCTTC
GACGCCTACG CATTGCGTAC GGTCGATGGC CCGCACGAGA TCACCGTCGA AGCCACGGGG
CGCCGCCATG CGTTCGCGGT GGTCCAGACG CAGACATCGA TGGCAGGGCG CGAGGTGGCA
CCGCTCGCCA CCGTGAGCGA GTATCGGCGC AACCCGCGTT TCGCGCAGCC CGCTGCCGAC
AGGCCTTCGC TCTATCCGCG CTGGCCCTAC CCTGCCGAAC GCTGGGGCAT GAACGTGGAT
CTCAACGCGT GCATTGGCTG CAACGCCTGC ACCGTCGCCT GCCAGGCCGA GAACAACATC
CCTGTCGTCG GCAAGGAAGA GGTCTCGCGC GGCCGGGTCA TGCACTGGAT ACGCGTCGAC
CGCTACGACG ACGCGCGCGA TACCGACGGC CGCGCGTCGC GCATTGTCTT CCAGCCCGTG
CCCTGCATGC ACTGCGAGGA CGCGCCCTGC GAGCTGGTAT GCCCGGTCGG CGCTACGGTG
CATGACAGCG CCGGCCTCAA CGTACAGGTG TACAACCGCT GCGTCGGCAC GCGGTTCTGC
TCGAACAACT GCCCGTACAA GGTGCGGCGC TTCAACTTCC TGCAGTACAG CAACCAGGGC
AATGACCGCC CGCCGCCTGC GTTCAACCCG GACGTCACCG TACGCCGCCG CGGCGTGATG
GAAAAATGCA CGTATTGCCT GCAGCGCATC ACGCGCGCGC GGATCGAGTC GGAAAAGCTC
GGCCAGCCGG TTCGCGATGG CGATGTCGTG ACGGCGTGCC AGGCCGCCTG TCCGACGCAA
GCGATTGCGT TCGGCAACCT CGACGATCCC GACAGCCAGG TCAGCCGGCT CAAGCGCGGG
CCGCGCAACT ATGACCTGCT TGCCGAACTG AACACCCGGC CGCGTACGAG CTATGCGGCG
CTGGTGACCA ATCCCGACGA TGCGCTCGCA TGA
|
|---|
| Protein sequence | MTRARVIPLV PVDEPSDAPR SPARRHFLRT TMAASAALAG AACSGPPAEM IVPYVQMPEG
IVPGRPLFYA TALTRHGYGM GVLVETNMGR PTKIEGNPRH PASLGATHPF DQAAVLQLWD
PDRSQAPYRG GALSGWAAFD AALATQRVQW RDRDGEGLRL LTGNVGSPTL SAQIAQWLDR
YPKAVWHVHD PLYDEDPSPR MAFGDDVDLL IDPKPATTIV TLDADLVGHG PAAVRHAHDF
MADRRGVAPM LACRLYAIES SPTLTGEISD NRLALPPHEI ERLAWSLARK LGVPDVPVDT
PEPASDTARH WIAVLARRLR EAPPGSSLLI AGGALSGPTR ALVWRLNARL GNLGKSVRPV
AGTPRRPLGE AHSIGALTEA MRAGAVSALL MIDVNPAYDA PCGLGFDAAL RHVPWSSHMG
VYRDETARLT TWHAPMAHDL ERWSDARAWD GTASIVQPVI APLNGGRSAH ELLSAAVDEH
QSGYDLVRAH WRARQRDDFD AFWEQALRTG VIADTAAPPA TTDMRQPITP PSFAAPPLVA
RFMPDPATDA GELANNAWLQ ELPRALTRHT WDNAALIGPL TARARRLSTG DIVVIRRTDR
QGNPIEAPVW VLPRHAEGVV SLPLGYGRRH AGRVGNGVGF DAYALRTVDG PHEITVEATG
RRHAFAVVQT QTSMAGREVA PLATVSEYRR NPRFAQPAAD RPSLYPRWPY PAERWGMNVD
LNACIGCNAC TVACQAENNI PVVGKEEVSR GRVMHWIRVD RYDDARDTDG RASRIVFQPV
PCMHCEDAPC ELVCPVGATV HDSAGLNVQV YNRCVGTRFC SNNCPYKVRR FNFLQYSNQG
NDRPPPAFNP DVTVRRRGVM EKCTYCLQRI TRARIESEKL GQPVRDGDVV TACQAACPTQ
AIAFGNLDDP DSQVSRLKRG PRNYDLLAEL NTRPRTSYAA LVTNPDDALA
|
|---|
| |